Cargando…

Peripheral Immune Cell Gene Expression Predicts Survival of Patients with Non-Small Cell Lung Cancer

Prediction of cancer recurrence in patients with non-small cell lung cancer (NSCLC) currently relies on the assessment of clinical characteristics including age, tumor stage, and smoking history. A better prediction of early stage cancer patients with poorer survival and late stage patients with bet...

Descripción completa

Detalles Bibliográficos
Autores principales: Kossenkov, Andrew V., Dawany, Noor, Evans, Tracey L., Kucharczuk, John C., Albelda, Steven M., Showe, Louise C., Showe, Michael K., Vachani, Anil
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3315526/
https://www.ncbi.nlm.nih.gov/pubmed/22479623
http://dx.doi.org/10.1371/journal.pone.0034392
_version_ 1782228248909840384
author Kossenkov, Andrew V.
Dawany, Noor
Evans, Tracey L.
Kucharczuk, John C.
Albelda, Steven M.
Showe, Louise C.
Showe, Michael K.
Vachani, Anil
author_facet Kossenkov, Andrew V.
Dawany, Noor
Evans, Tracey L.
Kucharczuk, John C.
Albelda, Steven M.
Showe, Louise C.
Showe, Michael K.
Vachani, Anil
author_sort Kossenkov, Andrew V.
collection PubMed
description Prediction of cancer recurrence in patients with non-small cell lung cancer (NSCLC) currently relies on the assessment of clinical characteristics including age, tumor stage, and smoking history. A better prediction of early stage cancer patients with poorer survival and late stage patients with better survival is needed to design patient-tailored treatment protocols. We analyzed gene expression in RNA from peripheral blood mononuclear cells (PBMC) of NSCLC patients to identify signatures predictive of overall patient survival. We find that PBMC gene expression patterns from NSCLC patients, like patterns from tumors, have information predictive of patient outcomes. We identify and validate a 26 gene prognostic panel that is independent of clinical stage. Many additional prognostic genes are specific to myeloid cells and are more highly expressed in patients with shorter survival. We also observe that significant numbers of prognostic genes change expression levels in PBMC collected after tumor resection. These post-surgery gene expression profiles may provide a means to re-evaluate prognosis over time. These studies further suggest that patient outcomes are not solely determined by tumor gene expression profiles but can also be influenced by the immune response as reflected in peripheral immune cells.
format Online
Article
Text
id pubmed-3315526
institution National Center for Biotechnology Information
language English
publishDate 2012
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-33155262012-04-04 Peripheral Immune Cell Gene Expression Predicts Survival of Patients with Non-Small Cell Lung Cancer Kossenkov, Andrew V. Dawany, Noor Evans, Tracey L. Kucharczuk, John C. Albelda, Steven M. Showe, Louise C. Showe, Michael K. Vachani, Anil PLoS One Research Article Prediction of cancer recurrence in patients with non-small cell lung cancer (NSCLC) currently relies on the assessment of clinical characteristics including age, tumor stage, and smoking history. A better prediction of early stage cancer patients with poorer survival and late stage patients with better survival is needed to design patient-tailored treatment protocols. We analyzed gene expression in RNA from peripheral blood mononuclear cells (PBMC) of NSCLC patients to identify signatures predictive of overall patient survival. We find that PBMC gene expression patterns from NSCLC patients, like patterns from tumors, have information predictive of patient outcomes. We identify and validate a 26 gene prognostic panel that is independent of clinical stage. Many additional prognostic genes are specific to myeloid cells and are more highly expressed in patients with shorter survival. We also observe that significant numbers of prognostic genes change expression levels in PBMC collected after tumor resection. These post-surgery gene expression profiles may provide a means to re-evaluate prognosis over time. These studies further suggest that patient outcomes are not solely determined by tumor gene expression profiles but can also be influenced by the immune response as reflected in peripheral immune cells. Public Library of Science 2012-03-29 /pmc/articles/PMC3315526/ /pubmed/22479623 http://dx.doi.org/10.1371/journal.pone.0034392 Text en Kossenkov et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Kossenkov, Andrew V.
Dawany, Noor
Evans, Tracey L.
Kucharczuk, John C.
Albelda, Steven M.
Showe, Louise C.
Showe, Michael K.
Vachani, Anil
Peripheral Immune Cell Gene Expression Predicts Survival of Patients with Non-Small Cell Lung Cancer
title Peripheral Immune Cell Gene Expression Predicts Survival of Patients with Non-Small Cell Lung Cancer
title_full Peripheral Immune Cell Gene Expression Predicts Survival of Patients with Non-Small Cell Lung Cancer
title_fullStr Peripheral Immune Cell Gene Expression Predicts Survival of Patients with Non-Small Cell Lung Cancer
title_full_unstemmed Peripheral Immune Cell Gene Expression Predicts Survival of Patients with Non-Small Cell Lung Cancer
title_short Peripheral Immune Cell Gene Expression Predicts Survival of Patients with Non-Small Cell Lung Cancer
title_sort peripheral immune cell gene expression predicts survival of patients with non-small cell lung cancer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3315526/
https://www.ncbi.nlm.nih.gov/pubmed/22479623
http://dx.doi.org/10.1371/journal.pone.0034392
work_keys_str_mv AT kossenkovandrewv peripheralimmunecellgeneexpressionpredictssurvivalofpatientswithnonsmallcelllungcancer
AT dawanynoor peripheralimmunecellgeneexpressionpredictssurvivalofpatientswithnonsmallcelllungcancer
AT evanstraceyl peripheralimmunecellgeneexpressionpredictssurvivalofpatientswithnonsmallcelllungcancer
AT kucharczukjohnc peripheralimmunecellgeneexpressionpredictssurvivalofpatientswithnonsmallcelllungcancer
AT albeldastevenm peripheralimmunecellgeneexpressionpredictssurvivalofpatientswithnonsmallcelllungcancer
AT showelouisec peripheralimmunecellgeneexpressionpredictssurvivalofpatientswithnonsmallcelllungcancer
AT showemichaelk peripheralimmunecellgeneexpressionpredictssurvivalofpatientswithnonsmallcelllungcancer
AT vachanianil peripheralimmunecellgeneexpressionpredictssurvivalofpatientswithnonsmallcelllungcancer