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A Mathematical Model for Interpretable Clinical Decision Support with Applications in Gynecology

BACKGROUND: Over time, methods for the development of clinical decision support (CDS) systems have evolved from interpretable and easy-to-use scoring systems to very complex and non-interpretable mathematical models. In order to accomplish effective decision support, CDS systems should provide infor...

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Autores principales: Van Belle, Vanya M. C. A., Van Calster, Ben, Timmerman, Dirk, Bourne, Tom, Bottomley, Cecilia, Valentin, Lil, Neven, Patrick, Van Huffel, Sabine, Suykens, Johan A. K., Boyd, Stephen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3315538/
https://www.ncbi.nlm.nih.gov/pubmed/22479598
http://dx.doi.org/10.1371/journal.pone.0034312
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author Van Belle, Vanya M. C. A.
Van Calster, Ben
Timmerman, Dirk
Bourne, Tom
Bottomley, Cecilia
Valentin, Lil
Neven, Patrick
Van Huffel, Sabine
Suykens, Johan A. K.
Boyd, Stephen
author_facet Van Belle, Vanya M. C. A.
Van Calster, Ben
Timmerman, Dirk
Bourne, Tom
Bottomley, Cecilia
Valentin, Lil
Neven, Patrick
Van Huffel, Sabine
Suykens, Johan A. K.
Boyd, Stephen
author_sort Van Belle, Vanya M. C. A.
collection PubMed
description BACKGROUND: Over time, methods for the development of clinical decision support (CDS) systems have evolved from interpretable and easy-to-use scoring systems to very complex and non-interpretable mathematical models. In order to accomplish effective decision support, CDS systems should provide information on how the model arrives at a certain decision. To address the issue of incompatibility between performance, interpretability and applicability of CDS systems, this paper proposes an innovative model structure, automatically leading to interpretable and easily applicable models. The resulting models can be used to guide clinicians when deciding upon the appropriate treatment, estimating patient-specific risks and to improve communication with patients. METHODS AND FINDINGS: We propose the interval coded scoring (ICS) system, which imposes that the effect of each variable on the estimated risk is constant within consecutive intervals. The number and position of the intervals are automatically obtained by solving an optimization problem, which additionally performs variable selection. The resulting model can be visualised by means of appealing scoring tables and color bars. ICS models can be used within software packages, in smartphone applications, or on paper, which is particularly useful for bedside medicine and home-monitoring. The ICS approach is illustrated on two gynecological problems: diagnosis of malignancy of ovarian tumors using a dataset containing 3,511 patients, and prediction of first trimester viability of pregnancies using a dataset of 1,435 women. Comparison of the performance of the ICS approach with a range of prediction models proposed in the literature illustrates the ability of ICS to combine optimal performance with the interpretability of simple scoring systems. CONCLUSIONS: The ICS approach can improve patient-clinician communication and will provide additional insights in the importance and influence of available variables. Future challenges include extensions of the proposed methodology towards automated detection of interaction effects, multi-class decision support systems, prognosis and high-dimensional data.
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spelling pubmed-33155382012-04-04 A Mathematical Model for Interpretable Clinical Decision Support with Applications in Gynecology Van Belle, Vanya M. C. A. Van Calster, Ben Timmerman, Dirk Bourne, Tom Bottomley, Cecilia Valentin, Lil Neven, Patrick Van Huffel, Sabine Suykens, Johan A. K. Boyd, Stephen PLoS One Research Article BACKGROUND: Over time, methods for the development of clinical decision support (CDS) systems have evolved from interpretable and easy-to-use scoring systems to very complex and non-interpretable mathematical models. In order to accomplish effective decision support, CDS systems should provide information on how the model arrives at a certain decision. To address the issue of incompatibility between performance, interpretability and applicability of CDS systems, this paper proposes an innovative model structure, automatically leading to interpretable and easily applicable models. The resulting models can be used to guide clinicians when deciding upon the appropriate treatment, estimating patient-specific risks and to improve communication with patients. METHODS AND FINDINGS: We propose the interval coded scoring (ICS) system, which imposes that the effect of each variable on the estimated risk is constant within consecutive intervals. The number and position of the intervals are automatically obtained by solving an optimization problem, which additionally performs variable selection. The resulting model can be visualised by means of appealing scoring tables and color bars. ICS models can be used within software packages, in smartphone applications, or on paper, which is particularly useful for bedside medicine and home-monitoring. The ICS approach is illustrated on two gynecological problems: diagnosis of malignancy of ovarian tumors using a dataset containing 3,511 patients, and prediction of first trimester viability of pregnancies using a dataset of 1,435 women. Comparison of the performance of the ICS approach with a range of prediction models proposed in the literature illustrates the ability of ICS to combine optimal performance with the interpretability of simple scoring systems. CONCLUSIONS: The ICS approach can improve patient-clinician communication and will provide additional insights in the importance and influence of available variables. Future challenges include extensions of the proposed methodology towards automated detection of interaction effects, multi-class decision support systems, prognosis and high-dimensional data. Public Library of Science 2012-03-29 /pmc/articles/PMC3315538/ /pubmed/22479598 http://dx.doi.org/10.1371/journal.pone.0034312 Text en Van Belle et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Van Belle, Vanya M. C. A.
Van Calster, Ben
Timmerman, Dirk
Bourne, Tom
Bottomley, Cecilia
Valentin, Lil
Neven, Patrick
Van Huffel, Sabine
Suykens, Johan A. K.
Boyd, Stephen
A Mathematical Model for Interpretable Clinical Decision Support with Applications in Gynecology
title A Mathematical Model for Interpretable Clinical Decision Support with Applications in Gynecology
title_full A Mathematical Model for Interpretable Clinical Decision Support with Applications in Gynecology
title_fullStr A Mathematical Model for Interpretable Clinical Decision Support with Applications in Gynecology
title_full_unstemmed A Mathematical Model for Interpretable Clinical Decision Support with Applications in Gynecology
title_short A Mathematical Model for Interpretable Clinical Decision Support with Applications in Gynecology
title_sort mathematical model for interpretable clinical decision support with applications in gynecology
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3315538/
https://www.ncbi.nlm.nih.gov/pubmed/22479598
http://dx.doi.org/10.1371/journal.pone.0034312
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