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Identification of Histoplasma-Specific Peptides in Human Urine

Histoplasmosis is a severe dimorphic fungus infection, which is often difficult to diagnose due to similarity in symptoms to other diseases and lack of specific diagnostic tests. Urine samples from histoplasma-antigen-positive patients and appropriate controls were prepared using various sample prep...

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Autores principales: Crockett, David K., Kushnir, Mark M., Cloud, Joann L., Ashwood, Edward R., Rockwood, Alan L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3321275/
https://www.ncbi.nlm.nih.gov/pubmed/22536271
http://dx.doi.org/10.1155/2012/621329
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author Crockett, David K.
Kushnir, Mark M.
Cloud, Joann L.
Ashwood, Edward R.
Rockwood, Alan L.
author_facet Crockett, David K.
Kushnir, Mark M.
Cloud, Joann L.
Ashwood, Edward R.
Rockwood, Alan L.
author_sort Crockett, David K.
collection PubMed
description Histoplasmosis is a severe dimorphic fungus infection, which is often difficult to diagnose due to similarity in symptoms to other diseases and lack of specific diagnostic tests. Urine samples from histoplasma-antigen-positive patients and appropriate controls were prepared using various sample preparation strategies including immunoenrichment, ultrafiltration, high-abundant protein depletion, deglycosylation, reverse-phase fractions, and digest using various enzymes. Samples were then analyzed by nanospray tandem mass spectrometry. Accurate mass TOF scans underwent molecular feature extraction and statistical analysis for unique disease makers, and acquired MS/MS data were searched against known human and histoplasma proteins. In human urine, some 52 peptides from 37 Histoplasma proteins were identified with high confidence. This is the first report of identification of a large number of Histoplasma-specific peptides from immunoassay-positive patient samples using tandem mass spectrometry and bioinformatics techniques. These findings may lead to novel diagnostic markers for histoplasmosis in human urine.
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spelling pubmed-33212752012-04-25 Identification of Histoplasma-Specific Peptides in Human Urine Crockett, David K. Kushnir, Mark M. Cloud, Joann L. Ashwood, Edward R. Rockwood, Alan L. Int J Pept Research Article Histoplasmosis is a severe dimorphic fungus infection, which is often difficult to diagnose due to similarity in symptoms to other diseases and lack of specific diagnostic tests. Urine samples from histoplasma-antigen-positive patients and appropriate controls were prepared using various sample preparation strategies including immunoenrichment, ultrafiltration, high-abundant protein depletion, deglycosylation, reverse-phase fractions, and digest using various enzymes. Samples were then analyzed by nanospray tandem mass spectrometry. Accurate mass TOF scans underwent molecular feature extraction and statistical analysis for unique disease makers, and acquired MS/MS data were searched against known human and histoplasma proteins. In human urine, some 52 peptides from 37 Histoplasma proteins were identified with high confidence. This is the first report of identification of a large number of Histoplasma-specific peptides from immunoassay-positive patient samples using tandem mass spectrometry and bioinformatics techniques. These findings may lead to novel diagnostic markers for histoplasmosis in human urine. Hindawi Publishing Corporation 2012 2012-03-26 /pmc/articles/PMC3321275/ /pubmed/22536271 http://dx.doi.org/10.1155/2012/621329 Text en Copyright © 2012 David K. Crockett et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Crockett, David K.
Kushnir, Mark M.
Cloud, Joann L.
Ashwood, Edward R.
Rockwood, Alan L.
Identification of Histoplasma-Specific Peptides in Human Urine
title Identification of Histoplasma-Specific Peptides in Human Urine
title_full Identification of Histoplasma-Specific Peptides in Human Urine
title_fullStr Identification of Histoplasma-Specific Peptides in Human Urine
title_full_unstemmed Identification of Histoplasma-Specific Peptides in Human Urine
title_short Identification of Histoplasma-Specific Peptides in Human Urine
title_sort identification of histoplasma-specific peptides in human urine
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3321275/
https://www.ncbi.nlm.nih.gov/pubmed/22536271
http://dx.doi.org/10.1155/2012/621329
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