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Identification of Histoplasma-Specific Peptides in Human Urine
Histoplasmosis is a severe dimorphic fungus infection, which is often difficult to diagnose due to similarity in symptoms to other diseases and lack of specific diagnostic tests. Urine samples from histoplasma-antigen-positive patients and appropriate controls were prepared using various sample prep...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3321275/ https://www.ncbi.nlm.nih.gov/pubmed/22536271 http://dx.doi.org/10.1155/2012/621329 |
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author | Crockett, David K. Kushnir, Mark M. Cloud, Joann L. Ashwood, Edward R. Rockwood, Alan L. |
author_facet | Crockett, David K. Kushnir, Mark M. Cloud, Joann L. Ashwood, Edward R. Rockwood, Alan L. |
author_sort | Crockett, David K. |
collection | PubMed |
description | Histoplasmosis is a severe dimorphic fungus infection, which is often difficult to diagnose due to similarity in symptoms to other diseases and lack of specific diagnostic tests. Urine samples from histoplasma-antigen-positive patients and appropriate controls were prepared using various sample preparation strategies including immunoenrichment, ultrafiltration, high-abundant protein depletion, deglycosylation, reverse-phase fractions, and digest using various enzymes. Samples were then analyzed by nanospray tandem mass spectrometry. Accurate mass TOF scans underwent molecular feature extraction and statistical analysis for unique disease makers, and acquired MS/MS data were searched against known human and histoplasma proteins. In human urine, some 52 peptides from 37 Histoplasma proteins were identified with high confidence. This is the first report of identification of a large number of Histoplasma-specific peptides from immunoassay-positive patient samples using tandem mass spectrometry and bioinformatics techniques. These findings may lead to novel diagnostic markers for histoplasmosis in human urine. |
format | Online Article Text |
id | pubmed-3321275 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-33212752012-04-25 Identification of Histoplasma-Specific Peptides in Human Urine Crockett, David K. Kushnir, Mark M. Cloud, Joann L. Ashwood, Edward R. Rockwood, Alan L. Int J Pept Research Article Histoplasmosis is a severe dimorphic fungus infection, which is often difficult to diagnose due to similarity in symptoms to other diseases and lack of specific diagnostic tests. Urine samples from histoplasma-antigen-positive patients and appropriate controls were prepared using various sample preparation strategies including immunoenrichment, ultrafiltration, high-abundant protein depletion, deglycosylation, reverse-phase fractions, and digest using various enzymes. Samples were then analyzed by nanospray tandem mass spectrometry. Accurate mass TOF scans underwent molecular feature extraction and statistical analysis for unique disease makers, and acquired MS/MS data were searched against known human and histoplasma proteins. In human urine, some 52 peptides from 37 Histoplasma proteins were identified with high confidence. This is the first report of identification of a large number of Histoplasma-specific peptides from immunoassay-positive patient samples using tandem mass spectrometry and bioinformatics techniques. These findings may lead to novel diagnostic markers for histoplasmosis in human urine. Hindawi Publishing Corporation 2012 2012-03-26 /pmc/articles/PMC3321275/ /pubmed/22536271 http://dx.doi.org/10.1155/2012/621329 Text en Copyright © 2012 David K. Crockett et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Crockett, David K. Kushnir, Mark M. Cloud, Joann L. Ashwood, Edward R. Rockwood, Alan L. Identification of Histoplasma-Specific Peptides in Human Urine |
title | Identification of Histoplasma-Specific Peptides in Human Urine |
title_full | Identification of Histoplasma-Specific Peptides in Human Urine |
title_fullStr | Identification of Histoplasma-Specific Peptides in Human Urine |
title_full_unstemmed | Identification of Histoplasma-Specific Peptides in Human Urine |
title_short | Identification of Histoplasma-Specific Peptides in Human Urine |
title_sort | identification of histoplasma-specific peptides in human urine |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3321275/ https://www.ncbi.nlm.nih.gov/pubmed/22536271 http://dx.doi.org/10.1155/2012/621329 |
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