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Emergent bursting and synchrony in computer simulations of neuronal cultures
Experimental studies of neuronal cultures have revealed a wide variety of spiking network activity ranging from sparse, asynchronous firing to distinct, network-wide synchronous bursting. However, the functional mechanisms driving these observed firing patterns are not well understood. In this work,...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3322356/ https://www.ncbi.nlm.nih.gov/pubmed/22514531 http://dx.doi.org/10.3389/fncom.2012.00015 |
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author | Maheswaranathan, Niru Ferrari, Silvia VanDongen, Antonius M. J. Henriquez, Craig S. |
author_facet | Maheswaranathan, Niru Ferrari, Silvia VanDongen, Antonius M. J. Henriquez, Craig S. |
author_sort | Maheswaranathan, Niru |
collection | PubMed |
description | Experimental studies of neuronal cultures have revealed a wide variety of spiking network activity ranging from sparse, asynchronous firing to distinct, network-wide synchronous bursting. However, the functional mechanisms driving these observed firing patterns are not well understood. In this work, we develop an in silico network of cortical neurons based on known features of similar in vitro networks. The activity from these simulations is found to closely mimic experimental data. Furthermore, the strength or degree of network bursting is found to depend on a few parameters: the density of the culture, the type of synaptic connections, and the ratio of excitatory to inhibitory connections. Network bursting gradually becomes more prominent as either the density, the fraction of long range connections, or the fraction of excitatory neurons is increased. Interestingly, biologically prevalent values of parameters result in networks that are at the transition between strong bursting and sparse firing. Using principal components analysis, we show that a large fraction of the variance in firing rates is captured by the first component for bursting networks. These results have implications for understanding how information is encoded at the population level as well as for why certain network parameters are ubiquitous in cortical tissue. |
format | Online Article Text |
id | pubmed-3322356 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-33223562012-04-18 Emergent bursting and synchrony in computer simulations of neuronal cultures Maheswaranathan, Niru Ferrari, Silvia VanDongen, Antonius M. J. Henriquez, Craig S. Front Comput Neurosci Neuroscience Experimental studies of neuronal cultures have revealed a wide variety of spiking network activity ranging from sparse, asynchronous firing to distinct, network-wide synchronous bursting. However, the functional mechanisms driving these observed firing patterns are not well understood. In this work, we develop an in silico network of cortical neurons based on known features of similar in vitro networks. The activity from these simulations is found to closely mimic experimental data. Furthermore, the strength or degree of network bursting is found to depend on a few parameters: the density of the culture, the type of synaptic connections, and the ratio of excitatory to inhibitory connections. Network bursting gradually becomes more prominent as either the density, the fraction of long range connections, or the fraction of excitatory neurons is increased. Interestingly, biologically prevalent values of parameters result in networks that are at the transition between strong bursting and sparse firing. Using principal components analysis, we show that a large fraction of the variance in firing rates is captured by the first component for bursting networks. These results have implications for understanding how information is encoded at the population level as well as for why certain network parameters are ubiquitous in cortical tissue. Frontiers Media S.A. 2012-04-03 /pmc/articles/PMC3322356/ /pubmed/22514531 http://dx.doi.org/10.3389/fncom.2012.00015 Text en Copyright © 2012 Maheswaranathan, Ferrari, VanDongen and Henriquez. http://www.frontiersin.org/licenseagreement This is an open-access article distributed under the terms of the Creative Commons Attribution Non Commercial License, which permits non-commercial use, distribution, and reproduction in other forums, provided the original authors and source are credited. |
spellingShingle | Neuroscience Maheswaranathan, Niru Ferrari, Silvia VanDongen, Antonius M. J. Henriquez, Craig S. Emergent bursting and synchrony in computer simulations of neuronal cultures |
title | Emergent bursting and synchrony in computer simulations of neuronal cultures |
title_full | Emergent bursting and synchrony in computer simulations of neuronal cultures |
title_fullStr | Emergent bursting and synchrony in computer simulations of neuronal cultures |
title_full_unstemmed | Emergent bursting and synchrony in computer simulations of neuronal cultures |
title_short | Emergent bursting and synchrony in computer simulations of neuronal cultures |
title_sort | emergent bursting and synchrony in computer simulations of neuronal cultures |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3322356/ https://www.ncbi.nlm.nih.gov/pubmed/22514531 http://dx.doi.org/10.3389/fncom.2012.00015 |
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