Cargando…

Multiple Subject Barycentric Discriminant Analysis (MUSUBADA): How to Assign Scans to Categories without Using Spatial Normalization

We present a new discriminant analysis (DA) method called Multiple Subject Barycentric Discriminant Analysis (MUSUBADA) suited for analyzing fMRI data because it handles datasets with multiple participants that each provides different number of variables (i.e., voxels) that are themselves grouped in...

Descripción completa

Detalles Bibliográficos
Autores principales: Abdi, Hervé, Williams, Lynne J., Connolly, Andrew C., Gobbini, M. Ida, Dunlop, Joseph P., Haxby, James V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3328164/
https://www.ncbi.nlm.nih.gov/pubmed/22548125
http://dx.doi.org/10.1155/2012/634165
_version_ 1782229703800651776
author Abdi, Hervé
Williams, Lynne J.
Connolly, Andrew C.
Gobbini, M. Ida
Dunlop, Joseph P.
Haxby, James V.
author_facet Abdi, Hervé
Williams, Lynne J.
Connolly, Andrew C.
Gobbini, M. Ida
Dunlop, Joseph P.
Haxby, James V.
author_sort Abdi, Hervé
collection PubMed
description We present a new discriminant analysis (DA) method called Multiple Subject Barycentric Discriminant Analysis (MUSUBADA) suited for analyzing fMRI data because it handles datasets with multiple participants that each provides different number of variables (i.e., voxels) that are themselves grouped into regions of interest (ROIs). Like DA, MUSUBADA (1) assigns observations to predefined categories, (2) gives factorial maps displaying observations and categories, and (3) optimally assigns observations to categories. MUSUBADA handles cases with more variables than observations and can project portions of the data table (e.g., subtables, which can represent participants or ROIs) on the factorial maps. Therefore MUSUBADA can analyze datasets with different voxel numbers per participant and, so does not require spatial normalization. MUSUBADA statistical inferences are implemented with cross-validation techniques (e.g., jackknife and bootstrap), its performance is evaluated with confusion matrices (for fixed and random models) and represented with prediction, tolerance, and confidence intervals. We present an example where we predict the image categories (houses, shoes, chairs, and human, monkey, dog, faces,) of images watched by participants whose brains were scanned. This example corresponds to a DA question in which the data table is made of subtables (one per subject) and with more variables than observations.
format Online
Article
Text
id pubmed-3328164
institution National Center for Biotechnology Information
language English
publishDate 2012
publisher Hindawi Publishing Corporation
record_format MEDLINE/PubMed
spelling pubmed-33281642012-04-30 Multiple Subject Barycentric Discriminant Analysis (MUSUBADA): How to Assign Scans to Categories without Using Spatial Normalization Abdi, Hervé Williams, Lynne J. Connolly, Andrew C. Gobbini, M. Ida Dunlop, Joseph P. Haxby, James V. Comput Math Methods Med Research Article We present a new discriminant analysis (DA) method called Multiple Subject Barycentric Discriminant Analysis (MUSUBADA) suited for analyzing fMRI data because it handles datasets with multiple participants that each provides different number of variables (i.e., voxels) that are themselves grouped into regions of interest (ROIs). Like DA, MUSUBADA (1) assigns observations to predefined categories, (2) gives factorial maps displaying observations and categories, and (3) optimally assigns observations to categories. MUSUBADA handles cases with more variables than observations and can project portions of the data table (e.g., subtables, which can represent participants or ROIs) on the factorial maps. Therefore MUSUBADA can analyze datasets with different voxel numbers per participant and, so does not require spatial normalization. MUSUBADA statistical inferences are implemented with cross-validation techniques (e.g., jackknife and bootstrap), its performance is evaluated with confusion matrices (for fixed and random models) and represented with prediction, tolerance, and confidence intervals. We present an example where we predict the image categories (houses, shoes, chairs, and human, monkey, dog, faces,) of images watched by participants whose brains were scanned. This example corresponds to a DA question in which the data table is made of subtables (one per subject) and with more variables than observations. Hindawi Publishing Corporation 2012 2012-04-05 /pmc/articles/PMC3328164/ /pubmed/22548125 http://dx.doi.org/10.1155/2012/634165 Text en Copyright © 2012 Hervé Abdi et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Abdi, Hervé
Williams, Lynne J.
Connolly, Andrew C.
Gobbini, M. Ida
Dunlop, Joseph P.
Haxby, James V.
Multiple Subject Barycentric Discriminant Analysis (MUSUBADA): How to Assign Scans to Categories without Using Spatial Normalization
title Multiple Subject Barycentric Discriminant Analysis (MUSUBADA): How to Assign Scans to Categories without Using Spatial Normalization
title_full Multiple Subject Barycentric Discriminant Analysis (MUSUBADA): How to Assign Scans to Categories without Using Spatial Normalization
title_fullStr Multiple Subject Barycentric Discriminant Analysis (MUSUBADA): How to Assign Scans to Categories without Using Spatial Normalization
title_full_unstemmed Multiple Subject Barycentric Discriminant Analysis (MUSUBADA): How to Assign Scans to Categories without Using Spatial Normalization
title_short Multiple Subject Barycentric Discriminant Analysis (MUSUBADA): How to Assign Scans to Categories without Using Spatial Normalization
title_sort multiple subject barycentric discriminant analysis (musubada): how to assign scans to categories without using spatial normalization
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3328164/
https://www.ncbi.nlm.nih.gov/pubmed/22548125
http://dx.doi.org/10.1155/2012/634165
work_keys_str_mv AT abdiherve multiplesubjectbarycentricdiscriminantanalysismusubadahowtoassignscanstocategorieswithoutusingspatialnormalization
AT williamslynnej multiplesubjectbarycentricdiscriminantanalysismusubadahowtoassignscanstocategorieswithoutusingspatialnormalization
AT connollyandrewc multiplesubjectbarycentricdiscriminantanalysismusubadahowtoassignscanstocategorieswithoutusingspatialnormalization
AT gobbinimida multiplesubjectbarycentricdiscriminantanalysismusubadahowtoassignscanstocategorieswithoutusingspatialnormalization
AT dunlopjosephp multiplesubjectbarycentricdiscriminantanalysismusubadahowtoassignscanstocategorieswithoutusingspatialnormalization
AT haxbyjamesv multiplesubjectbarycentricdiscriminantanalysismusubadahowtoassignscanstocategorieswithoutusingspatialnormalization