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18S rDNA Phylogeny of Lamproderma and Allied Genera (Stemonitales, Myxomycetes, Amoebozoa)

The phylogenetic position of the slime-mould genus Lamproderma (Myxomycetes, Amoebozoa) challenges traditional taxonomy: although it displays the typical characters of the order Stemonitales, it appears to be sister to Physarales. This study provides a small subunit (18S or SSU) ribosomal RNA gene-b...

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Autores principales: Fiore-Donno, Anna Maria, Kamono, Akiko, Meyer, Marianne, Schnittler, Martin, Fukui, Manabu, Cavalier-Smith, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3329430/
https://www.ncbi.nlm.nih.gov/pubmed/22530009
http://dx.doi.org/10.1371/journal.pone.0035359
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author Fiore-Donno, Anna Maria
Kamono, Akiko
Meyer, Marianne
Schnittler, Martin
Fukui, Manabu
Cavalier-Smith, Thomas
author_facet Fiore-Donno, Anna Maria
Kamono, Akiko
Meyer, Marianne
Schnittler, Martin
Fukui, Manabu
Cavalier-Smith, Thomas
author_sort Fiore-Donno, Anna Maria
collection PubMed
description The phylogenetic position of the slime-mould genus Lamproderma (Myxomycetes, Amoebozoa) challenges traditional taxonomy: although it displays the typical characters of the order Stemonitales, it appears to be sister to Physarales. This study provides a small subunit (18S or SSU) ribosomal RNA gene-based phylogeny of Lamproderma and its allies, with new sequences from 49 specimens in 12 genera. We found that the order Stemonitales and Lamproderma were both ancestral to Physarales and that Lamproderma constitutes several clades intermingled with species of Diacheopsis, Colloderma and Elaeomyxa. We suggest that these genera may have evolved from Lamproderma by multiple losses of fruiting body stalks and that many taxonomic revisions are needed. We found such high genetic diversity within three Lamproderma species that they probably consist of clusters of sibling species. We discuss the contrasts between genetic and morphological divergence and implications for the morphospecies concept, highlighting the phylogenetically most reliable morphological characters and pointing to others that have been overestimated. In addition, we showed that the first part (∼600 bases) of the SSU rDNA gene is a valuable tool for phylogeny in Myxomycetes, since it displayed sufficient variability to distinguish closely related taxa and never failed to cluster together specimens considered of the same species.
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spelling pubmed-33294302012-04-23 18S rDNA Phylogeny of Lamproderma and Allied Genera (Stemonitales, Myxomycetes, Amoebozoa) Fiore-Donno, Anna Maria Kamono, Akiko Meyer, Marianne Schnittler, Martin Fukui, Manabu Cavalier-Smith, Thomas PLoS One Research Article The phylogenetic position of the slime-mould genus Lamproderma (Myxomycetes, Amoebozoa) challenges traditional taxonomy: although it displays the typical characters of the order Stemonitales, it appears to be sister to Physarales. This study provides a small subunit (18S or SSU) ribosomal RNA gene-based phylogeny of Lamproderma and its allies, with new sequences from 49 specimens in 12 genera. We found that the order Stemonitales and Lamproderma were both ancestral to Physarales and that Lamproderma constitutes several clades intermingled with species of Diacheopsis, Colloderma and Elaeomyxa. We suggest that these genera may have evolved from Lamproderma by multiple losses of fruiting body stalks and that many taxonomic revisions are needed. We found such high genetic diversity within three Lamproderma species that they probably consist of clusters of sibling species. We discuss the contrasts between genetic and morphological divergence and implications for the morphospecies concept, highlighting the phylogenetically most reliable morphological characters and pointing to others that have been overestimated. In addition, we showed that the first part (∼600 bases) of the SSU rDNA gene is a valuable tool for phylogeny in Myxomycetes, since it displayed sufficient variability to distinguish closely related taxa and never failed to cluster together specimens considered of the same species. Public Library of Science 2012-04-18 /pmc/articles/PMC3329430/ /pubmed/22530009 http://dx.doi.org/10.1371/journal.pone.0035359 Text en Fiore-Donno et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Fiore-Donno, Anna Maria
Kamono, Akiko
Meyer, Marianne
Schnittler, Martin
Fukui, Manabu
Cavalier-Smith, Thomas
18S rDNA Phylogeny of Lamproderma and Allied Genera (Stemonitales, Myxomycetes, Amoebozoa)
title 18S rDNA Phylogeny of Lamproderma and Allied Genera (Stemonitales, Myxomycetes, Amoebozoa)
title_full 18S rDNA Phylogeny of Lamproderma and Allied Genera (Stemonitales, Myxomycetes, Amoebozoa)
title_fullStr 18S rDNA Phylogeny of Lamproderma and Allied Genera (Stemonitales, Myxomycetes, Amoebozoa)
title_full_unstemmed 18S rDNA Phylogeny of Lamproderma and Allied Genera (Stemonitales, Myxomycetes, Amoebozoa)
title_short 18S rDNA Phylogeny of Lamproderma and Allied Genera (Stemonitales, Myxomycetes, Amoebozoa)
title_sort 18s rdna phylogeny of lamproderma and allied genera (stemonitales, myxomycetes, amoebozoa)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3329430/
https://www.ncbi.nlm.nih.gov/pubmed/22530009
http://dx.doi.org/10.1371/journal.pone.0035359
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