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Cross-Talk and Information Transfer in Mammalian and Bacterial Signaling

In mammalian and bacterial cells simple phosphorylation circuits play an important role in signaling. Bacteria have hundreds of two-component signaling systems that involve phosphotransfer between a receptor and a response regulator. In mammalian cells a similar pathway is the TGF-beta pathway, wher...

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Autores principales: Lyons, Samanthe M., Prasad, Ashok
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3329486/
https://www.ncbi.nlm.nih.gov/pubmed/22529918
http://dx.doi.org/10.1371/journal.pone.0034488
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author Lyons, Samanthe M.
Prasad, Ashok
author_facet Lyons, Samanthe M.
Prasad, Ashok
author_sort Lyons, Samanthe M.
collection PubMed
description In mammalian and bacterial cells simple phosphorylation circuits play an important role in signaling. Bacteria have hundreds of two-component signaling systems that involve phosphotransfer between a receptor and a response regulator. In mammalian cells a similar pathway is the TGF-beta pathway, where extracellular TGF-beta ligands activate cell surface receptors that phosphorylate Smad proteins, which in turn activate many genes. In TGF-beta signaling the multiplicity of ligands begs the question as to whether cells can distinguish signals coming from different ligands, but transduced through a small set of Smads. Here we use information theory with stochastic simulations of networks to address this question. We find that when signals are transduced through only one Smad, the cell cannot distinguish between different levels of the external ligands. Increasing the number of Smads from one to two significantly improves information transmission as well as the ability to discriminate between ligands. Surprisingly, both total information transmitted and the capacity to discriminate between ligands are quite insensitive to high levels of cross-talk between the two Smads. Robustness against cross-talk requires that the average amplitude of the signals are large. We find that smaller systems, as exemplified by some two-component systems in bacteria, are significantly much less robust against cross-talk. For such system sizes phosphotransfer is also less robust against cross-talk than phosphorylation. This suggests that mammalian signal transduction can tolerate a high amount of cross-talk without degrading information content. This may have played a role in the evolution of new functionalities from small mutations in signaling pathways, allowed for the development of cross-regulation and led to increased overall robustness due to redundancy in signaling pathways. On the other hand the lack of cross-regulation observed in many bacterial two-component systems may partly be due to the loss of information content due to cross-talk.
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spelling pubmed-33294862012-04-23 Cross-Talk and Information Transfer in Mammalian and Bacterial Signaling Lyons, Samanthe M. Prasad, Ashok PLoS One Research Article In mammalian and bacterial cells simple phosphorylation circuits play an important role in signaling. Bacteria have hundreds of two-component signaling systems that involve phosphotransfer between a receptor and a response regulator. In mammalian cells a similar pathway is the TGF-beta pathway, where extracellular TGF-beta ligands activate cell surface receptors that phosphorylate Smad proteins, which in turn activate many genes. In TGF-beta signaling the multiplicity of ligands begs the question as to whether cells can distinguish signals coming from different ligands, but transduced through a small set of Smads. Here we use information theory with stochastic simulations of networks to address this question. We find that when signals are transduced through only one Smad, the cell cannot distinguish between different levels of the external ligands. Increasing the number of Smads from one to two significantly improves information transmission as well as the ability to discriminate between ligands. Surprisingly, both total information transmitted and the capacity to discriminate between ligands are quite insensitive to high levels of cross-talk between the two Smads. Robustness against cross-talk requires that the average amplitude of the signals are large. We find that smaller systems, as exemplified by some two-component systems in bacteria, are significantly much less robust against cross-talk. For such system sizes phosphotransfer is also less robust against cross-talk than phosphorylation. This suggests that mammalian signal transduction can tolerate a high amount of cross-talk without degrading information content. This may have played a role in the evolution of new functionalities from small mutations in signaling pathways, allowed for the development of cross-regulation and led to increased overall robustness due to redundancy in signaling pathways. On the other hand the lack of cross-regulation observed in many bacterial two-component systems may partly be due to the loss of information content due to cross-talk. Public Library of Science 2012-04-18 /pmc/articles/PMC3329486/ /pubmed/22529918 http://dx.doi.org/10.1371/journal.pone.0034488 Text en Lyons, Prasad. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Lyons, Samanthe M.
Prasad, Ashok
Cross-Talk and Information Transfer in Mammalian and Bacterial Signaling
title Cross-Talk and Information Transfer in Mammalian and Bacterial Signaling
title_full Cross-Talk and Information Transfer in Mammalian and Bacterial Signaling
title_fullStr Cross-Talk and Information Transfer in Mammalian and Bacterial Signaling
title_full_unstemmed Cross-Talk and Information Transfer in Mammalian and Bacterial Signaling
title_short Cross-Talk and Information Transfer in Mammalian and Bacterial Signaling
title_sort cross-talk and information transfer in mammalian and bacterial signaling
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3329486/
https://www.ncbi.nlm.nih.gov/pubmed/22529918
http://dx.doi.org/10.1371/journal.pone.0034488
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