Cargando…

Comprehensive analysis of the KSHV MiRNA targetome by Ago-HITS-CLIP

Detalles Bibliográficos
Autores principales:	Haecker, Irina, Gay, Lauren, Morse, Alison, McCrory, Marty, Yang, Yajie, Hu, Jianhong, McIntyre, Lauren, Renne, Rolf
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2012
Materias:	Oral Presentation
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3330110/ http://dx.doi.org/10.1186/1750-9378-7-S1-O4

Ejemplares similares

Ago HITS-CLIP Expands Understanding of Kaposi's Sarcoma-associated Herpesvirus miRNA Function in Primary Effusion Lymphomas
por: Haecker, Irina, et al.
Publicado: (2012)

Correction: Ago HITS-CLIP Expands Understanding of Kaposi's Sarcoma-associated Herpesvirus miRNA Function in Primary Effusion Lymphomas
por: Haecker, Irina, et al.
Publicado: (2013)

A systems biology approach identified different regulatory networks targeted by KSHV miR-K12-11 in B cells and endothelial cells
por: Yang, Yajie, et al.
Publicado: (2014)

Leveraging biological replicates to improve analysis in ChIP-seq experiments
por: Yang, Yajie, et al.
Publicado: (2014)

KSHV miRNAs Decrease Expression of Lytic Genes in Latently Infected PEL and Endothelial Cells by Targeting Host Transcription Factors
por: Plaisance-Bonstaff, Karlie, et al.
Publicado: (2014)

Cross-Linking Ligation and Sequencing of Hybrids (qCLASH) Reveals an Unpredicted miRNA Targetome in Melanoma Cells
por: Kozar, Ines, et al.
Publicado: (2021)

Ago HITS-CLIP decodes miRNA-mRNA interaction maps
por: Chi, Sung Wook, et al.
Publicado: (2009)

A Toolbox for Herpesvirus miRNA Research: Construction of a Complete Set of KSHV miRNA Deletion Mutants
por: Jain, Vaibhav, et al.
Publicado: (2016)

LANA Binds to Multiple Active Viral and Cellular Promoters and Associates with the H3K4Methyltransferase hSET1 Complex
por: Hu, Jianhong, et al.
Publicado: (2014)

Argonaute CLIP-Seq reveals miRNA targetome diversity across tissue types
por: Clark, Peter M., et al.
Publicado: (2014)

AGO HITS-CLIP reveals distinct miRNA regulation of white and brown adipose tissue identity
por: O'Connor, Sean, et al.
Publicado: (2021)

microRNA dependent and independent deregulation of long non-coding RNAs by an oncogenic herpesvirus
por: Sethuraman, Sunantha, et al.
Publicado: (2017)

Elucidation of transcriptome-wide microRNA binding sites in human cardiac tissues by Ago2 HITS-CLIP
por: Spengler, Ryan M., et al.
Publicado: (2016)

From benchmarking HITS-CLIP peak detection programs to a new method for identification of miRNA-binding sites from Ago2-CLIP data
por: Bottini, Silvia, et al.
Publicado: (2017)

MiR-CLIP reveals iso-miR selective regulation in the miR-124 targetome
por: Wang, Yuluan, et al.
Publicado: (2020)

Ago HITS-CLIP expands microRNA-mRNA interactions in nucleus and cytoplasm of gastric cancer cells
por: Zhang, Xinyi, et al.
Publicado: (2019)

A core laboratory for the generation of quality-controlled g-herpesvirus bacmids: generation of KSHV microRNA mutants
por: Krueger, Brian, et al.
Publicado: (2012)

Analysis of the miRNA targetome in EBV-infected B cells
por: Skalsky, Rebecca L, et al.
Publicado: (2012)

Polymorphism studies on microRNA targetome of thalassemia
por: Galehdari, Hamid, et al.
Publicado: (2018)

Dissecting phenotypic responses of the druggable targetome in cancers
por: Jeong, Euna, et al.
Publicado: (2019)

Challenges in microRNAs’ targetome prediction and validation
por: Rojo Arias, Jesus Eduardo, et al.
Publicado: (2019)

MicroRNAs and Their Targetomes in Tumor-Immune Communication
por: Cho, Sunglim, et al.
Publicado: (2020)

Key MicroRNA’s and Their Targetome in Adrenocortical Cancer
por: Chehade, Marthe, et al.
Publicado: (2020)

Identification of the miRNA targetome in hippocampal neurons using RIP-seq
por: Malmevik, Josephine, et al.
Publicado: (2015)

CLIP-EZ: a computational tool for HITS-CLIP data analysis
por: Zhong, Xue, et al.
Publicado: (2014)

Upregulation of xCT by KSHV-Encoded microRNAs Facilitates KSHV Dissemination and Persistence in an Environment of Oxidative Stress
por: Qin, Zhiqiang, et al.
Publicado: (2010)

Targetome analysis of chaperone-mediated autophagy in cancer cells
por: Hao, Yuqing, et al.
Publicado: (2019)

In vivo 3′-to-5′ exoribonuclease targetomes of Streptococcus pyogenes
por: Lécrivain, Anne-Laure, et al.
Publicado: (2018)

Identification of Cellular Genes Targeted by KSHV-Encoded MicroRNAs
por: Samols, Mark A, et al.
Publicado: (2007)

The Landscape of microRNA Targeting in Prostate Cancer Defined by AGO-PAR-CLIP()
por: Hamilton, Mark P., et al.
Publicado: (2016)

2nd Accelerator Instrumentation Workshop
por: McCrory, Elliott S
Publicado: (1991)

The Viral and Cellular MicroRNA Targetome in Lymphoblastoid Cell Lines
por: Skalsky, Rebecca L., et al.
Publicado: (2012)

Involving the microRNA Targetome in Esophageal-Cancer Development and Behavior
por: Dias, Francisca, et al.
Publicado: (2018)

PDGFRA defines the mesenchymal stem cell Kaposi’s sarcoma progenitors by enabling KSHV oncogenesis in an angiogenic environment
por: Naipauer, Julian, et al.
Publicado: (2019)

KSHV encoded miRNA single nucleotide polymorphisms identified in clinical samples can affect miRNA processing and level of expression
por: Marshall, Vickie, et al.
Publicado: (2012)

The Role of Bacteria in KSHV Infection and KSHV-Induced Cancers
por: Markazi, Ashley, et al.
Publicado: (2021)

Computational analysis of ribonomics datasets identifies long non-coding RNA targets of γ-herpesviral miRNAs
por: Sethuraman, Sunantha, et al.
Publicado: (2018)

OHE for spread prevention
por: McCrory, P. V.
Publicado: (2021)

High-throughput sequencing analysis of a “hit and run” cell and animal model of KSHV tumorigenesis
por: Naipauer, Julian, et al.
Publicado: (2020)

Learning to Predict miRNA-mRNA Interactions from AGO CLIP Sequencing and CLASH Data
por: Lu, Yuheng, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_qvouneepijqlcgjli5q1o2g78i