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i-rDNA: alignment-free algorithm for rapid in silico detection of ribosomal gene fragments from metagenomic sequence data sets
BACKGROUND: Obtaining accurate estimates of microbial diversity using rDNA profiling is the first step in most metagenomics projects. Consequently, most metagenomic projects spend considerable amounts of time, money and manpower for experimentally cloning, amplifying and sequencing the rDNA content...
Autores principales: | Mohammed, Monzoorul Haque, Ghosh, Tarini Shankar, Chadaram, Sudha, Mande, Sharmila S |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3333171/ https://www.ncbi.nlm.nih.gov/pubmed/22369265 http://dx.doi.org/10.1186/1471-2164-12-S3-S12 |
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