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Protein fold determined by paramagnetic magic-angle spinning solid-state NMR spectroscopy
Biomacromolecules that are challenging for the usual structural techniques can be studied with atomic resolution by solid-state nuclear magnetic resonance. However, the paucity of >5 Å distance restraints, traditionally derived from measurements of magnetic dipole-dipole couplings between protein...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3335742/ https://www.ncbi.nlm.nih.gov/pubmed/22522262 http://dx.doi.org/10.1038/nchem.1299 |
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author | Sengupta, Ishita Nadaud, Philippe S. Helmus, Jonathan J. Schwieters, Charles D. Jaroniec, Christopher P. |
author_facet | Sengupta, Ishita Nadaud, Philippe S. Helmus, Jonathan J. Schwieters, Charles D. Jaroniec, Christopher P. |
author_sort | Sengupta, Ishita |
collection | PubMed |
description | Biomacromolecules that are challenging for the usual structural techniques can be studied with atomic resolution by solid-state nuclear magnetic resonance. However, the paucity of >5 Å distance restraints, traditionally derived from measurements of magnetic dipole-dipole couplings between protein nuclei, is a major bottleneck that hampers such structure elucidation efforts. Here we describe a general approach that enables the rapid determination of global protein fold in the solid phase via measurements of nuclear paramagnetic relaxation enhancements (PREs) in several analogs of the protein of interest containing covalently-attached paramagnetic tags, without the use of conventional internuclear distance restraints. The method is demonstrated using six cysteine-EDTA-Cu(2+) mutants of the 56-residue B1 immunoglobulin-binding domain of protein G, for which ~230 longitudinal backbone (15)N PREs corresponding to ~10-20 Å distances were obtained. The mean protein fold determined in this manner agrees with the X-ray structure with a backbone atom root-mean-square deviation of 1.8 Å. |
format | Online Article Text |
id | pubmed-3335742 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
record_format | MEDLINE/PubMed |
spelling | pubmed-33357422012-11-01 Protein fold determined by paramagnetic magic-angle spinning solid-state NMR spectroscopy Sengupta, Ishita Nadaud, Philippe S. Helmus, Jonathan J. Schwieters, Charles D. Jaroniec, Christopher P. Nat Chem Article Biomacromolecules that are challenging for the usual structural techniques can be studied with atomic resolution by solid-state nuclear magnetic resonance. However, the paucity of >5 Å distance restraints, traditionally derived from measurements of magnetic dipole-dipole couplings between protein nuclei, is a major bottleneck that hampers such structure elucidation efforts. Here we describe a general approach that enables the rapid determination of global protein fold in the solid phase via measurements of nuclear paramagnetic relaxation enhancements (PREs) in several analogs of the protein of interest containing covalently-attached paramagnetic tags, without the use of conventional internuclear distance restraints. The method is demonstrated using six cysteine-EDTA-Cu(2+) mutants of the 56-residue B1 immunoglobulin-binding domain of protein G, for which ~230 longitudinal backbone (15)N PREs corresponding to ~10-20 Å distances were obtained. The mean protein fold determined in this manner agrees with the X-ray structure with a backbone atom root-mean-square deviation of 1.8 Å. 2012-03-18 /pmc/articles/PMC3335742/ /pubmed/22522262 http://dx.doi.org/10.1038/nchem.1299 Text en Users may view, print, copy, download and text and data- mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: http://www.nature.com/authors/editorial_policies/license.html#terms |
spellingShingle | Article Sengupta, Ishita Nadaud, Philippe S. Helmus, Jonathan J. Schwieters, Charles D. Jaroniec, Christopher P. Protein fold determined by paramagnetic magic-angle spinning solid-state NMR spectroscopy |
title | Protein fold determined by paramagnetic magic-angle spinning solid-state NMR spectroscopy |
title_full | Protein fold determined by paramagnetic magic-angle spinning solid-state NMR spectroscopy |
title_fullStr | Protein fold determined by paramagnetic magic-angle spinning solid-state NMR spectroscopy |
title_full_unstemmed | Protein fold determined by paramagnetic magic-angle spinning solid-state NMR spectroscopy |
title_short | Protein fold determined by paramagnetic magic-angle spinning solid-state NMR spectroscopy |
title_sort | protein fold determined by paramagnetic magic-angle spinning solid-state nmr spectroscopy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3335742/ https://www.ncbi.nlm.nih.gov/pubmed/22522262 http://dx.doi.org/10.1038/nchem.1299 |
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