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Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi

Opportunistic human pathogenic fungi like the ubiquitous fungus Aspergillus fumigatus are a major threat to immunocompromised patients. An impaired immune system renders the body vulnerable to invasive mycoses that often lead to the death of the patient. While the number of immunocompromised patient...

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Autores principales: Tokarski, Christian, Hummert, Sabine, Mech, Franziska, Figge, Marc Thilo, Germerodt, Sebastian, Schroeter, Anja, Schuster, Stefan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Research Foundation 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3337507/
https://www.ncbi.nlm.nih.gov/pubmed/22557995
http://dx.doi.org/10.3389/fmicb.2012.00129
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author Tokarski, Christian
Hummert, Sabine
Mech, Franziska
Figge, Marc Thilo
Germerodt, Sebastian
Schroeter, Anja
Schuster, Stefan
author_facet Tokarski, Christian
Hummert, Sabine
Mech, Franziska
Figge, Marc Thilo
Germerodt, Sebastian
Schroeter, Anja
Schuster, Stefan
author_sort Tokarski, Christian
collection PubMed
description Opportunistic human pathogenic fungi like the ubiquitous fungus Aspergillus fumigatus are a major threat to immunocompromised patients. An impaired immune system renders the body vulnerable to invasive mycoses that often lead to the death of the patient. While the number of immunocompromised patients is rising with medical progress, the process, and dynamics of defense against invaded and ready to germinate fungal conidia are still insufficiently understood. Besides macrophages, neutrophil granulocytes form an important line of defense in that they clear conidia. Live imaging shows the interaction of those phagocytes and conidia as a dynamic process of touching, dragging, and phagocytosis. To unravel strategies of phagocytes on the hunt for conidia an agent-based modeling approach is used, implemented in NetLogo. Different modes of movement of phagocytes are tested regarding their clearing efficiency: random walk, short-term persistence in their recent direction, chemotaxis of chemokines excreted by conidia, and communication between phagocytes. While the short-term persistence hunting strategy turned out to be superior to the simple random walk, following a gradient of chemokines released by conidial agents is even better. The advantage of communication between neutrophilic agents showed a strong dependency on the spatial scale of the focused area and the distribution of the pathogens.
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spelling pubmed-33375072012-05-03 Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi Tokarski, Christian Hummert, Sabine Mech, Franziska Figge, Marc Thilo Germerodt, Sebastian Schroeter, Anja Schuster, Stefan Front Microbiol Microbiology Opportunistic human pathogenic fungi like the ubiquitous fungus Aspergillus fumigatus are a major threat to immunocompromised patients. An impaired immune system renders the body vulnerable to invasive mycoses that often lead to the death of the patient. While the number of immunocompromised patients is rising with medical progress, the process, and dynamics of defense against invaded and ready to germinate fungal conidia are still insufficiently understood. Besides macrophages, neutrophil granulocytes form an important line of defense in that they clear conidia. Live imaging shows the interaction of those phagocytes and conidia as a dynamic process of touching, dragging, and phagocytosis. To unravel strategies of phagocytes on the hunt for conidia an agent-based modeling approach is used, implemented in NetLogo. Different modes of movement of phagocytes are tested regarding their clearing efficiency: random walk, short-term persistence in their recent direction, chemotaxis of chemokines excreted by conidia, and communication between phagocytes. While the short-term persistence hunting strategy turned out to be superior to the simple random walk, following a gradient of chemokines released by conidial agents is even better. The advantage of communication between neutrophilic agents showed a strong dependency on the spatial scale of the focused area and the distribution of the pathogens. Frontiers Research Foundation 2012-04-26 /pmc/articles/PMC3337507/ /pubmed/22557995 http://dx.doi.org/10.3389/fmicb.2012.00129 Text en Copyright © 2012 Tokarski, Hummert, Mech, Figge, Germerodt, Schroeter and Schuster. http://www.frontiersin.org/licenseagreement This is an open-access article distributed under the terms of the Creative Commons Attribution Non Commercial License, which permits non-commercial use, distribution, and reproduction in other forums, provided the original authors and source are credited.
spellingShingle Microbiology
Tokarski, Christian
Hummert, Sabine
Mech, Franziska
Figge, Marc Thilo
Germerodt, Sebastian
Schroeter, Anja
Schuster, Stefan
Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi
title Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi
title_full Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi
title_fullStr Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi
title_full_unstemmed Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi
title_short Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi
title_sort agent-based modeling approach of immune defense against spores of opportunistic human pathogenic fungi
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3337507/
https://www.ncbi.nlm.nih.gov/pubmed/22557995
http://dx.doi.org/10.3389/fmicb.2012.00129
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