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Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi
Opportunistic human pathogenic fungi like the ubiquitous fungus Aspergillus fumigatus are a major threat to immunocompromised patients. An impaired immune system renders the body vulnerable to invasive mycoses that often lead to the death of the patient. While the number of immunocompromised patient...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Research Foundation
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3337507/ https://www.ncbi.nlm.nih.gov/pubmed/22557995 http://dx.doi.org/10.3389/fmicb.2012.00129 |
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author | Tokarski, Christian Hummert, Sabine Mech, Franziska Figge, Marc Thilo Germerodt, Sebastian Schroeter, Anja Schuster, Stefan |
author_facet | Tokarski, Christian Hummert, Sabine Mech, Franziska Figge, Marc Thilo Germerodt, Sebastian Schroeter, Anja Schuster, Stefan |
author_sort | Tokarski, Christian |
collection | PubMed |
description | Opportunistic human pathogenic fungi like the ubiquitous fungus Aspergillus fumigatus are a major threat to immunocompromised patients. An impaired immune system renders the body vulnerable to invasive mycoses that often lead to the death of the patient. While the number of immunocompromised patients is rising with medical progress, the process, and dynamics of defense against invaded and ready to germinate fungal conidia are still insufficiently understood. Besides macrophages, neutrophil granulocytes form an important line of defense in that they clear conidia. Live imaging shows the interaction of those phagocytes and conidia as a dynamic process of touching, dragging, and phagocytosis. To unravel strategies of phagocytes on the hunt for conidia an agent-based modeling approach is used, implemented in NetLogo. Different modes of movement of phagocytes are tested regarding their clearing efficiency: random walk, short-term persistence in their recent direction, chemotaxis of chemokines excreted by conidia, and communication between phagocytes. While the short-term persistence hunting strategy turned out to be superior to the simple random walk, following a gradient of chemokines released by conidial agents is even better. The advantage of communication between neutrophilic agents showed a strong dependency on the spatial scale of the focused area and the distribution of the pathogens. |
format | Online Article Text |
id | pubmed-3337507 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Frontiers Research Foundation |
record_format | MEDLINE/PubMed |
spelling | pubmed-33375072012-05-03 Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi Tokarski, Christian Hummert, Sabine Mech, Franziska Figge, Marc Thilo Germerodt, Sebastian Schroeter, Anja Schuster, Stefan Front Microbiol Microbiology Opportunistic human pathogenic fungi like the ubiquitous fungus Aspergillus fumigatus are a major threat to immunocompromised patients. An impaired immune system renders the body vulnerable to invasive mycoses that often lead to the death of the patient. While the number of immunocompromised patients is rising with medical progress, the process, and dynamics of defense against invaded and ready to germinate fungal conidia are still insufficiently understood. Besides macrophages, neutrophil granulocytes form an important line of defense in that they clear conidia. Live imaging shows the interaction of those phagocytes and conidia as a dynamic process of touching, dragging, and phagocytosis. To unravel strategies of phagocytes on the hunt for conidia an agent-based modeling approach is used, implemented in NetLogo. Different modes of movement of phagocytes are tested regarding their clearing efficiency: random walk, short-term persistence in their recent direction, chemotaxis of chemokines excreted by conidia, and communication between phagocytes. While the short-term persistence hunting strategy turned out to be superior to the simple random walk, following a gradient of chemokines released by conidial agents is even better. The advantage of communication between neutrophilic agents showed a strong dependency on the spatial scale of the focused area and the distribution of the pathogens. Frontiers Research Foundation 2012-04-26 /pmc/articles/PMC3337507/ /pubmed/22557995 http://dx.doi.org/10.3389/fmicb.2012.00129 Text en Copyright © 2012 Tokarski, Hummert, Mech, Figge, Germerodt, Schroeter and Schuster. http://www.frontiersin.org/licenseagreement This is an open-access article distributed under the terms of the Creative Commons Attribution Non Commercial License, which permits non-commercial use, distribution, and reproduction in other forums, provided the original authors and source are credited. |
spellingShingle | Microbiology Tokarski, Christian Hummert, Sabine Mech, Franziska Figge, Marc Thilo Germerodt, Sebastian Schroeter, Anja Schuster, Stefan Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi |
title | Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi |
title_full | Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi |
title_fullStr | Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi |
title_full_unstemmed | Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi |
title_short | Agent-Based Modeling Approach of Immune Defense Against Spores of Opportunistic Human Pathogenic Fungi |
title_sort | agent-based modeling approach of immune defense against spores of opportunistic human pathogenic fungi |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3337507/ https://www.ncbi.nlm.nih.gov/pubmed/22557995 http://dx.doi.org/10.3389/fmicb.2012.00129 |
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