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Mining Gene Ontology Data with AGENDA
The Gene Ontology (GO) initiative is a collaborative effort that uses controlled vocabularies for annotating genetic information. We here present AGENDA (Application for mining Gene Ontology Data), a novel web-based tool for accessing the GO database. AGENDA allows the user to simultaneously retriev...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Libertas Academica
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3337784/ https://www.ncbi.nlm.nih.gov/pubmed/22553422 http://dx.doi.org/10.4137/BBI.S9101 |
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author | Ovezmyradov, Guvanch Lu, Qianhao Göpfert, Martin C. |
author_facet | Ovezmyradov, Guvanch Lu, Qianhao Göpfert, Martin C. |
author_sort | Ovezmyradov, Guvanch |
collection | PubMed |
description | The Gene Ontology (GO) initiative is a collaborative effort that uses controlled vocabularies for annotating genetic information. We here present AGENDA (Application for mining Gene Ontology Data), a novel web-based tool for accessing the GO database. AGENDA allows the user to simultaneously retrieve and compare gene lists linked to different GO terms in diverse species using batch queries, facilitating comparative approaches to genetic information. The web-based application offers diverse search options and allows the user to bookmark, visualize, and download the results. AGENDA is an open source web-based application that is freely available for non-commercial use at the project homepage. URL: http://sourceforge.net/projects/bioagenda. |
format | Online Article Text |
id | pubmed-3337784 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Libertas Academica |
record_format | MEDLINE/PubMed |
spelling | pubmed-33377842012-05-02 Mining Gene Ontology Data with AGENDA Ovezmyradov, Guvanch Lu, Qianhao Göpfert, Martin C. Bioinform Biol Insights Original Research The Gene Ontology (GO) initiative is a collaborative effort that uses controlled vocabularies for annotating genetic information. We here present AGENDA (Application for mining Gene Ontology Data), a novel web-based tool for accessing the GO database. AGENDA allows the user to simultaneously retrieve and compare gene lists linked to different GO terms in diverse species using batch queries, facilitating comparative approaches to genetic information. The web-based application offers diverse search options and allows the user to bookmark, visualize, and download the results. AGENDA is an open source web-based application that is freely available for non-commercial use at the project homepage. URL: http://sourceforge.net/projects/bioagenda. Libertas Academica 2012-04-18 /pmc/articles/PMC3337784/ /pubmed/22553422 http://dx.doi.org/10.4137/BBI.S9101 Text en © the author(s), publisher and licensee Libertas Academica Ltd. This is an open access article. Unrestricted non-commercial use is permitted provided the original work is properly cited. |
spellingShingle | Original Research Ovezmyradov, Guvanch Lu, Qianhao Göpfert, Martin C. Mining Gene Ontology Data with AGENDA |
title | Mining Gene Ontology Data with AGENDA |
title_full | Mining Gene Ontology Data with AGENDA |
title_fullStr | Mining Gene Ontology Data with AGENDA |
title_full_unstemmed | Mining Gene Ontology Data with AGENDA |
title_short | Mining Gene Ontology Data with AGENDA |
title_sort | mining gene ontology data with agenda |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3337784/ https://www.ncbi.nlm.nih.gov/pubmed/22553422 http://dx.doi.org/10.4137/BBI.S9101 |
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