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Mining Gene Ontology Data with AGENDA

The Gene Ontology (GO) initiative is a collaborative effort that uses controlled vocabularies for annotating genetic information. We here present AGENDA (Application for mining Gene Ontology Data), a novel web-based tool for accessing the GO database. AGENDA allows the user to simultaneously retriev...

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Detalles Bibliográficos
Autores principales: Ovezmyradov, Guvanch, Lu, Qianhao, Göpfert, Martin C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Libertas Academica 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3337784/
https://www.ncbi.nlm.nih.gov/pubmed/22553422
http://dx.doi.org/10.4137/BBI.S9101
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author Ovezmyradov, Guvanch
Lu, Qianhao
Göpfert, Martin C.
author_facet Ovezmyradov, Guvanch
Lu, Qianhao
Göpfert, Martin C.
author_sort Ovezmyradov, Guvanch
collection PubMed
description The Gene Ontology (GO) initiative is a collaborative effort that uses controlled vocabularies for annotating genetic information. We here present AGENDA (Application for mining Gene Ontology Data), a novel web-based tool for accessing the GO database. AGENDA allows the user to simultaneously retrieve and compare gene lists linked to different GO terms in diverse species using batch queries, facilitating comparative approaches to genetic information. The web-based application offers diverse search options and allows the user to bookmark, visualize, and download the results. AGENDA is an open source web-based application that is freely available for non-commercial use at the project homepage. URL: http://sourceforge.net/projects/bioagenda.
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spelling pubmed-33377842012-05-02 Mining Gene Ontology Data with AGENDA Ovezmyradov, Guvanch Lu, Qianhao Göpfert, Martin C. Bioinform Biol Insights Original Research The Gene Ontology (GO) initiative is a collaborative effort that uses controlled vocabularies for annotating genetic information. We here present AGENDA (Application for mining Gene Ontology Data), a novel web-based tool for accessing the GO database. AGENDA allows the user to simultaneously retrieve and compare gene lists linked to different GO terms in diverse species using batch queries, facilitating comparative approaches to genetic information. The web-based application offers diverse search options and allows the user to bookmark, visualize, and download the results. AGENDA is an open source web-based application that is freely available for non-commercial use at the project homepage. URL: http://sourceforge.net/projects/bioagenda. Libertas Academica 2012-04-18 /pmc/articles/PMC3337784/ /pubmed/22553422 http://dx.doi.org/10.4137/BBI.S9101 Text en © the author(s), publisher and licensee Libertas Academica Ltd. This is an open access article. Unrestricted non-commercial use is permitted provided the original work is properly cited.
spellingShingle Original Research
Ovezmyradov, Guvanch
Lu, Qianhao
Göpfert, Martin C.
Mining Gene Ontology Data with AGENDA
title Mining Gene Ontology Data with AGENDA
title_full Mining Gene Ontology Data with AGENDA
title_fullStr Mining Gene Ontology Data with AGENDA
title_full_unstemmed Mining Gene Ontology Data with AGENDA
title_short Mining Gene Ontology Data with AGENDA
title_sort mining gene ontology data with agenda
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3337784/
https://www.ncbi.nlm.nih.gov/pubmed/22553422
http://dx.doi.org/10.4137/BBI.S9101
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