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A Chemocentric Approach to the Identification of Cancer Targets

A novel chemocentric approach to identifying cancer-relevant targets is introduced. Starting with a large chemical collection, the strategy uses the list of small molecule hits arising from a differential cytotoxicity screening on tumor HCT116 and normal MRC-5 cell lines to identify proteins associa...

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Autores principales: Flachner, Beáta, Lörincz, Zsolt, Carotti, Angelo, Nicolotti, Orazio, Kuchipudi, Praveena, Remez, Nikita, Sanz, Ferran, Tóvári, József, Szabó, Miklós J., Bertók, Béla, Cseh, Sándor, Mestres, Jordi, Dormán, György
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3338416/
https://www.ncbi.nlm.nih.gov/pubmed/22558171
http://dx.doi.org/10.1371/journal.pone.0035582
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author Flachner, Beáta
Lörincz, Zsolt
Carotti, Angelo
Nicolotti, Orazio
Kuchipudi, Praveena
Remez, Nikita
Sanz, Ferran
Tóvári, József
Szabó, Miklós J.
Bertók, Béla
Cseh, Sándor
Mestres, Jordi
Dormán, György
author_facet Flachner, Beáta
Lörincz, Zsolt
Carotti, Angelo
Nicolotti, Orazio
Kuchipudi, Praveena
Remez, Nikita
Sanz, Ferran
Tóvári, József
Szabó, Miklós J.
Bertók, Béla
Cseh, Sándor
Mestres, Jordi
Dormán, György
author_sort Flachner, Beáta
collection PubMed
description A novel chemocentric approach to identifying cancer-relevant targets is introduced. Starting with a large chemical collection, the strategy uses the list of small molecule hits arising from a differential cytotoxicity screening on tumor HCT116 and normal MRC-5 cell lines to identify proteins associated with cancer emerging from a differential virtual target profiling of the most selective compounds detected in both cell lines. It is shown that this smart combination of differential in vitro and in silico screenings (DIVISS) is capable of detecting a list of proteins that are already well accepted cancer drug targets, while complementing it with additional proteins that, targeted selectively or in combination with others, could lead to synergistic benefits for cancer therapeutics. The complete list of 115 proteins identified as being hit uniquely by compounds showing selective antiproliferative effects for tumor cell lines is provided.
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spelling pubmed-33384162012-05-03 A Chemocentric Approach to the Identification of Cancer Targets Flachner, Beáta Lörincz, Zsolt Carotti, Angelo Nicolotti, Orazio Kuchipudi, Praveena Remez, Nikita Sanz, Ferran Tóvári, József Szabó, Miklós J. Bertók, Béla Cseh, Sándor Mestres, Jordi Dormán, György PLoS One Research Article A novel chemocentric approach to identifying cancer-relevant targets is introduced. Starting with a large chemical collection, the strategy uses the list of small molecule hits arising from a differential cytotoxicity screening on tumor HCT116 and normal MRC-5 cell lines to identify proteins associated with cancer emerging from a differential virtual target profiling of the most selective compounds detected in both cell lines. It is shown that this smart combination of differential in vitro and in silico screenings (DIVISS) is capable of detecting a list of proteins that are already well accepted cancer drug targets, while complementing it with additional proteins that, targeted selectively or in combination with others, could lead to synergistic benefits for cancer therapeutics. The complete list of 115 proteins identified as being hit uniquely by compounds showing selective antiproliferative effects for tumor cell lines is provided. Public Library of Science 2012-04-25 /pmc/articles/PMC3338416/ /pubmed/22558171 http://dx.doi.org/10.1371/journal.pone.0035582 Text en Flachner et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Flachner, Beáta
Lörincz, Zsolt
Carotti, Angelo
Nicolotti, Orazio
Kuchipudi, Praveena
Remez, Nikita
Sanz, Ferran
Tóvári, József
Szabó, Miklós J.
Bertók, Béla
Cseh, Sándor
Mestres, Jordi
Dormán, György
A Chemocentric Approach to the Identification of Cancer Targets
title A Chemocentric Approach to the Identification of Cancer Targets
title_full A Chemocentric Approach to the Identification of Cancer Targets
title_fullStr A Chemocentric Approach to the Identification of Cancer Targets
title_full_unstemmed A Chemocentric Approach to the Identification of Cancer Targets
title_short A Chemocentric Approach to the Identification of Cancer Targets
title_sort chemocentric approach to the identification of cancer targets
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3338416/
https://www.ncbi.nlm.nih.gov/pubmed/22558171
http://dx.doi.org/10.1371/journal.pone.0035582
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