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Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels

Anguilla eels are divided into temperate and tropical eels, based on their major distributions. The present study collected two temperate eels, Anguilla japonica and Anguilla anguilla, and two tropical eels, Anguilla marmorata and Anguilla bicolor pacifica, to examine two questions: do temperate and...

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Autor principal: Tseng, Mei-Chen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3344214/
https://www.ncbi.nlm.nih.gov/pubmed/22605978
http://dx.doi.org/10.3390/ijms13044281
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author Tseng, Mei-Chen
author_facet Tseng, Mei-Chen
author_sort Tseng, Mei-Chen
collection PubMed
description Anguilla eels are divided into temperate and tropical eels, based on their major distributions. The present study collected two temperate eels, Anguilla japonica and Anguilla anguilla, and two tropical eels, Anguilla marmorata and Anguilla bicolor pacifica, to examine two questions: do temperate and tropical Anguilla eels have different genetic polymorphic patterns?; and do temperate Anguilla japonica and Anguilla anguilla have a closer relationship to each other than to tropical eels? In total, 274 sequences were cloned and sequenced from six conserved microsatellite loci to examine polymorphic patterns of these four catadromous eels. Different mutational events, including substitutions, and repeat-unit deletions and insertions, appeared in major regions, while different point mutations were observed in flanking regions. The results implied that parallel patterns of microsatellite sequences occurred within both tropical and temperate freshwater eels. Consensus flanking sequences of six homologous loci from each of the four species were constructed. Genetic distances ranged from 0.044 (Anguilla bicolor pacifica vs. Anguilla marmorata) to 0.061 (Anguilla marmorata vs. Anguilla anguilla). The tree topology suggests the hypothesis of Anguilla japonica and Anguilla anguilla being a sister group must be rejected.
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spelling pubmed-33442142012-05-17 Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels Tseng, Mei-Chen Int J Mol Sci Article Anguilla eels are divided into temperate and tropical eels, based on their major distributions. The present study collected two temperate eels, Anguilla japonica and Anguilla anguilla, and two tropical eels, Anguilla marmorata and Anguilla bicolor pacifica, to examine two questions: do temperate and tropical Anguilla eels have different genetic polymorphic patterns?; and do temperate Anguilla japonica and Anguilla anguilla have a closer relationship to each other than to tropical eels? In total, 274 sequences were cloned and sequenced from six conserved microsatellite loci to examine polymorphic patterns of these four catadromous eels. Different mutational events, including substitutions, and repeat-unit deletions and insertions, appeared in major regions, while different point mutations were observed in flanking regions. The results implied that parallel patterns of microsatellite sequences occurred within both tropical and temperate freshwater eels. Consensus flanking sequences of six homologous loci from each of the four species were constructed. Genetic distances ranged from 0.044 (Anguilla bicolor pacifica vs. Anguilla marmorata) to 0.061 (Anguilla marmorata vs. Anguilla anguilla). The tree topology suggests the hypothesis of Anguilla japonica and Anguilla anguilla being a sister group must be rejected. Molecular Diversity Preservation International (MDPI) 2012-04-02 /pmc/articles/PMC3344214/ /pubmed/22605978 http://dx.doi.org/10.3390/ijms13044281 Text en © 2012 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Tseng, Mei-Chen
Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels
title Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels
title_full Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels
title_fullStr Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels
title_full_unstemmed Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels
title_short Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels
title_sort evolution of microsatellite loci of tropical and temperate anguilla eels
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3344214/
https://www.ncbi.nlm.nih.gov/pubmed/22605978
http://dx.doi.org/10.3390/ijms13044281
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