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Isolation and Characterization of Twelve Polymorphic Microsatellite Loci for the Cocoa Mirid Bug Sahlbergella Singularis

Mirids are the primary pests affecting cocoa production in Africa, but no genetic studies have been conducted on these insects. Here we report the isolation and characterization of 12 polymorphic microsatellite loci for Sahlbergella singularis. A microsatellite-enriched genomic DNA library was devel...

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Autores principales: Babin, Régis, Fenouillet, Catherine, Legavre, Thierry, Blondin, Laurence, Calatayud, Caroline, Risterucci, Ange-Marie, Chapuis, Marie-Pierre
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3344222/
https://www.ncbi.nlm.nih.gov/pubmed/22605986
http://dx.doi.org/10.3390/ijms13044412
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author Babin, Régis
Fenouillet, Catherine
Legavre, Thierry
Blondin, Laurence
Calatayud, Caroline
Risterucci, Ange-Marie
Chapuis, Marie-Pierre
author_facet Babin, Régis
Fenouillet, Catherine
Legavre, Thierry
Blondin, Laurence
Calatayud, Caroline
Risterucci, Ange-Marie
Chapuis, Marie-Pierre
author_sort Babin, Régis
collection PubMed
description Mirids are the primary pests affecting cocoa production in Africa, but no genetic studies have been conducted on these insects. Here we report the isolation and characterization of 12 polymorphic microsatellite loci for Sahlbergella singularis. A microsatellite-enriched genomic DNA library was developed and screened to identify marker loci. Twelve polymorphic loci were identified by screening 28 individuals collected from one presumed population in cocoa plantations in Southern Cameroon. The number of alleles ranged from 5 to 25, whereas the observed and the expected heterozygosities ranged from 0.179 to 0.786 and from 0.671 to 0.946, respectively. Tests showed significant deviations from HW equilibrium for four loci, but no linkage disequilibrium was detected at any of the loci. No cross-species amplification was observed in two other mirid pests in Africa.
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spelling pubmed-33442222012-05-17 Isolation and Characterization of Twelve Polymorphic Microsatellite Loci for the Cocoa Mirid Bug Sahlbergella Singularis Babin, Régis Fenouillet, Catherine Legavre, Thierry Blondin, Laurence Calatayud, Caroline Risterucci, Ange-Marie Chapuis, Marie-Pierre Int J Mol Sci Article Mirids are the primary pests affecting cocoa production in Africa, but no genetic studies have been conducted on these insects. Here we report the isolation and characterization of 12 polymorphic microsatellite loci for Sahlbergella singularis. A microsatellite-enriched genomic DNA library was developed and screened to identify marker loci. Twelve polymorphic loci were identified by screening 28 individuals collected from one presumed population in cocoa plantations in Southern Cameroon. The number of alleles ranged from 5 to 25, whereas the observed and the expected heterozygosities ranged from 0.179 to 0.786 and from 0.671 to 0.946, respectively. Tests showed significant deviations from HW equilibrium for four loci, but no linkage disequilibrium was detected at any of the loci. No cross-species amplification was observed in two other mirid pests in Africa. Molecular Diversity Preservation International (MDPI) 2012-04-10 /pmc/articles/PMC3344222/ /pubmed/22605986 http://dx.doi.org/10.3390/ijms13044412 Text en © 2012 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Babin, Régis
Fenouillet, Catherine
Legavre, Thierry
Blondin, Laurence
Calatayud, Caroline
Risterucci, Ange-Marie
Chapuis, Marie-Pierre
Isolation and Characterization of Twelve Polymorphic Microsatellite Loci for the Cocoa Mirid Bug Sahlbergella Singularis
title Isolation and Characterization of Twelve Polymorphic Microsatellite Loci for the Cocoa Mirid Bug Sahlbergella Singularis
title_full Isolation and Characterization of Twelve Polymorphic Microsatellite Loci for the Cocoa Mirid Bug Sahlbergella Singularis
title_fullStr Isolation and Characterization of Twelve Polymorphic Microsatellite Loci for the Cocoa Mirid Bug Sahlbergella Singularis
title_full_unstemmed Isolation and Characterization of Twelve Polymorphic Microsatellite Loci for the Cocoa Mirid Bug Sahlbergella Singularis
title_short Isolation and Characterization of Twelve Polymorphic Microsatellite Loci for the Cocoa Mirid Bug Sahlbergella Singularis
title_sort isolation and characterization of twelve polymorphic microsatellite loci for the cocoa mirid bug sahlbergella singularis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3344222/
https://www.ncbi.nlm.nih.gov/pubmed/22605986
http://dx.doi.org/10.3390/ijms13044412
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