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Development of Eighteen Microsatellite Markers in Anemone amurensis (Ranunculaceae) and Cross-Amplification in Congeneric Species

Polyploidy plays an important role in the evolution of plant genomes. To enable the investigation of the polyploidy events within the genus Anemone, we developed eighteen microsatellite markers from the hexaploid species A. amurensis (Ranunculaceae), and tested their transferability in five closely...

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Autores principales: Sun, Mingzhou, Yin, Xiao, Shi, Fengxue, Li, Lin, Li, Mingrui, Li, Linfeng, Xiao, Hongxing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3344253/
https://www.ncbi.nlm.nih.gov/pubmed/22606017
http://dx.doi.org/10.3390/ijms13044889
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author Sun, Mingzhou
Yin, Xiao
Shi, Fengxue
Li, Lin
Li, Mingrui
Li, Linfeng
Xiao, Hongxing
author_facet Sun, Mingzhou
Yin, Xiao
Shi, Fengxue
Li, Lin
Li, Mingrui
Li, Linfeng
Xiao, Hongxing
author_sort Sun, Mingzhou
collection PubMed
description Polyploidy plays an important role in the evolution of plant genomes. To enable the investigation of the polyploidy events within the genus Anemone, we developed eighteen microsatellite markers from the hexaploid species A. amurensis (Ranunculaceae), and tested their transferability in five closely related species. The number of total alleles (N(A)) for each resulting locus varied from one to eight. The polymorphism information content (PIC) and Nei’s genetic diversity (N(GD)) for these microsatellites ranged from 0.00 to 0.71 and 0.00 to 0.91, respectively. For each population, the N(A) was one to seven, and the values of PIC and N(GD) varied from 0.00 to 0.84 and 0.00 to 0.95, respectively. In addition, most of these microsatellites can be amplified successfully in the congeneric species. These microsatellite primers provide us an opportunity to study the polyploid evolution in the genus Anemone.
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spelling pubmed-33442532012-05-17 Development of Eighteen Microsatellite Markers in Anemone amurensis (Ranunculaceae) and Cross-Amplification in Congeneric Species Sun, Mingzhou Yin, Xiao Shi, Fengxue Li, Lin Li, Mingrui Li, Linfeng Xiao, Hongxing Int J Mol Sci Article Polyploidy plays an important role in the evolution of plant genomes. To enable the investigation of the polyploidy events within the genus Anemone, we developed eighteen microsatellite markers from the hexaploid species A. amurensis (Ranunculaceae), and tested their transferability in five closely related species. The number of total alleles (N(A)) for each resulting locus varied from one to eight. The polymorphism information content (PIC) and Nei’s genetic diversity (N(GD)) for these microsatellites ranged from 0.00 to 0.71 and 0.00 to 0.91, respectively. For each population, the N(A) was one to seven, and the values of PIC and N(GD) varied from 0.00 to 0.84 and 0.00 to 0.95, respectively. In addition, most of these microsatellites can be amplified successfully in the congeneric species. These microsatellite primers provide us an opportunity to study the polyploid evolution in the genus Anemone. Molecular Diversity Preservation International (MDPI) 2012-04-18 /pmc/articles/PMC3344253/ /pubmed/22606017 http://dx.doi.org/10.3390/ijms13044889 Text en © 2012 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Sun, Mingzhou
Yin, Xiao
Shi, Fengxue
Li, Lin
Li, Mingrui
Li, Linfeng
Xiao, Hongxing
Development of Eighteen Microsatellite Markers in Anemone amurensis (Ranunculaceae) and Cross-Amplification in Congeneric Species
title Development of Eighteen Microsatellite Markers in Anemone amurensis (Ranunculaceae) and Cross-Amplification in Congeneric Species
title_full Development of Eighteen Microsatellite Markers in Anemone amurensis (Ranunculaceae) and Cross-Amplification in Congeneric Species
title_fullStr Development of Eighteen Microsatellite Markers in Anemone amurensis (Ranunculaceae) and Cross-Amplification in Congeneric Species
title_full_unstemmed Development of Eighteen Microsatellite Markers in Anemone amurensis (Ranunculaceae) and Cross-Amplification in Congeneric Species
title_short Development of Eighteen Microsatellite Markers in Anemone amurensis (Ranunculaceae) and Cross-Amplification in Congeneric Species
title_sort development of eighteen microsatellite markers in anemone amurensis (ranunculaceae) and cross-amplification in congeneric species
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3344253/
https://www.ncbi.nlm.nih.gov/pubmed/22606017
http://dx.doi.org/10.3390/ijms13044889
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