Cargando…

RNA-Seq Identifies SNP Markers for Growth Traits in Rainbow Trout

Fast growth is an important and highly desired trait, which affects the profitability of food animal production, with feed costs accounting for the largest proportion of production costs. Traditional phenotype-based selection is typically used to select for growth traits; however, genetic improvemen...

Descripción completa

Detalles Bibliográficos
Autores principales:	Salem, Mohamed, Vallejo, Roger L., Leeds, Timothy D., Palti, Yniv, Liu, Sixin, Sabbagh, Annas, Rexroad, Caird E., Yao, Jianbo
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2012
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3344853/ https://www.ncbi.nlm.nih.gov/pubmed/22574143 http://dx.doi.org/10.1371/journal.pone.0036264

Ejemplares similares

QTL affecting stress response to crowding in a rainbow trout broodstock population
por: Rexroad, Caird E, et al.
Publicado: (2012)

RNA-seq Analysis of Early Hepatic Response to Handling and Confinement Stress in Rainbow Trout
por: Liu, Sixin, et al.
Publicado: (2014)

A second generation genetic map for rainbow trout (Oncorhynchus mykiss)
por: Rexroad, Caird E, et al.
Publicado: (2008)

Identification of SNPs associated with muscle yield and quality traits using allelic-imbalance analyses of pooled RNA-Seq samples in rainbow trout
por: Al-Tobasei, Rafet, et al.
Publicado: (2017)

Assessment of Genetic Correlation between Bacterial Cold Water Disease Resistance and Spleen Index in a Domesticated Population of Rainbow Trout: Identification of QTL on Chromosome Omy19
por: Wiens, Gregory D., et al.
Publicado: (2013)

Genomic structure and expression of uncoupling protein 2 genes in rainbow trout (Oncorhynchus mykiss)
por: Coulibaly, Issa, et al.
Publicado: (2006)

Detection and Validation of QTL Affecting Bacterial Cold Water Disease Resistance in Rainbow Trout Using Restriction-Site Associated DNA Sequencing
por: Palti, Yniv, et al.
Publicado: (2015)

A first generation integrated map of the rainbow trout genome
por: Palti, Yniv, et al.
Publicado: (2011)

Transcriptome profiling in fast versus slow-growing rainbow trout across seasonal gradients
por: Danzmann, Roy G., et al.
Publicado: (2016)

A first generation BAC-based physical map of the rainbow trout genome
por: Palti, Yniv, et al.
Publicado: (2009)

Retrospective Evaluation of Marker-Assisted Selection for Resistance to Bacterial Cold Water Disease in Three Generations of a Commercial Rainbow Trout Breeding Population
por: Liu, Sixin, et al.
Publicado: (2018)

Estimates of linkage disequilibrium and effective population size in rainbow trout
por: Rexroad, Caird E, et al.
Publicado: (2009)

Genome-Wide Association Analysis With a 50K Transcribed Gene SNP-Chip Identifies QTL Affecting Muscle Yield in Rainbow Trout
por: Salem, Mohamed, et al.
Publicado: (2018)

Identification of single nucleotide polymorphism markers associated with bacterial cold water disease resistance and spleen size in rainbow trout
por: Liu, Sixin, et al.
Publicado: (2015)

Comparative mapping of expressed sequence tags containing microsatellites in rainbow trout (Oncorhynchus mykiss)
por: Rexroad, Caird E, et al.
Publicado: (2005)

Single nucleotide polymorphism discovery in rainbow trout by deep sequencing of a reduced representation library
por: Sánchez, Cecilia Castaño, et al.
Publicado: (2009)

Effect of starvation on global gene expression and proteolysis in rainbow trout (Oncorhynchus mykiss)
por: Salem, Mohamed, et al.
Publicado: (2007)

Identification of High-Confidence Structural Variants in Domesticated Rainbow Trout Using Whole-Genome Sequencing
por: Liu, Sixin, et al.
Publicado: (2021)

Similar Genetic Architecture with Shared and Unique Quantitative Trait Loci for Bacterial Cold Water Disease Resistance in Two Rainbow Trout Breeding Populations
por: Vallejo, Roger L., et al.
Publicado: (2017)

Identification of Haplotypes Associated With Resistance to Bacterial Cold Water Disease in Rainbow Trout Using Whole-Genome Resequencing
por: Liu, Sixin, et al.
Publicado: (2022)

Genome-Wide Association Study for Identifying Loci that Affect Fillet Yield, Carcass, and Body Weight Traits in Rainbow Trout (Oncorhynchus mykiss)
por: Gonzalez-Pena, Dianelys, et al.
Publicado: (2016)

Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches
por: Salem, Mohamed, et al.
Publicado: (2010)

Characterization of the rainbow trout spleen transcriptome and identification of immune-related genes
por: Ali, Ali, et al.
Publicado: (2014)

Characterization of the Rainbow Trout Egg MicroRNA Transcriptome
por: Ma, Hao, et al.
Publicado: (2012)

Whole-genome mapping of quantitative trait loci and accuracy of genomic predictions for resistance to columnaris disease in two rainbow trout breeding populations
por: Silva, Rafael M. O., et al.
Publicado: (2019)

Cloning and characterization of microRNAs from rainbow trout (Oncorhynchus mykiss): Their expression during early embryonic development
por: Ramachandra, Raghuveer K, et al.
Publicado: (2008)

Transcriptome Assembly, Gene Annotation and Tissue Gene Expression Atlas of the Rainbow Trout
por: Salem, Mohamed, et al.
Publicado: (2015)

Genomic selection models substantially improve the accuracy of genetic merit predictions for fillet yield and body weight in rainbow trout using a multi-trait model and multi-generation progeny testing
por: Garcia, Andre, et al.
Publicado: (2023)

Evaluation of Genome-Enabled Selection for Bacterial Cold Water Disease Resistance Using Progeny Performance Data in Rainbow Trout: Insights on Genotyping Methods and Genomic Prediction Models
por: Vallejo, Roger L., et al.
Publicado: (2016)

Generation of a reference transcriptome for evaluating rainbow trout responses to various stressors
por: Sánchez, Cecilia C, et al.
Publicado: (2011)

RNA-Seq reveals MicroRNA expression signature and genetic polymorphism associated with growth and muscle quality traits in rainbow trout
por: Paneru, Bam Dev, et al.
Publicado: (2017)

Genomic selection models double the accuracy of predicted breeding values for bacterial cold water disease resistance compared to a traditional pedigree-based model in rainbow trout aquaculture
por: Vallejo, Roger L., et al.
Publicado: (2017)

Differential expression of long non-coding RNAs in three genetic lines of rainbow trout in response to infection with Flavobacterium psychrophilum
por: Paneru, Bam, et al.
Publicado: (2016)

Cloning and characterization of a novel oocyte-specific gene encoding an F-Box protein in rainbow trout (Oncorhynchus mykiss)
por: Wang, Lei, et al.
Publicado: (2013)

Gene expression in the brain and kidney of rainbow trout in response to handling stress
por: Krasnov, Aleksei, et al.
Publicado: (2005)

Genomic predictions for fillet yield and firmness in rainbow trout using reduced-density SNP panels
por: Al-Tobasei, Rafet, et al.
Publicado: (2021)

Whole-body transcriptome of selectively bred, resistant-, control-, and susceptible-line rainbow trout following experimental challenge with Flavobacterium psychrophilum
por: Marancik, David, et al.
Publicado: (2015)

Analysis of BAC-end sequences in rainbow trout: Content characterization and assessment of synteny between trout and other fish genomes
por: Genet, Carine, et al.
Publicado: (2011)

Development of a High-Density 665 K SNP Array for Rainbow Trout Genome-Wide Genotyping
por: Bernard, Maria, et al.
Publicado: (2022)

RNA-Seq analysis of the pyloric caecum, liver, and muscle reveals molecular mechanisms regulating fillet color in rainbow trout
por: Ahmed, Ridwan O., et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_ocj9699tjk3a1lvuau88hs06gm