Cargando…
Characterization of eDNA from the Clinical Strain Acinetobacter baumannii AIIMS 7 and Its Role in Biofilm Formation
Release of extracellular DNA (eDNA) was observed during in vitro growth of a clinical strain of Acinetobacter baumannii. Membrane vesicles (MV) of varying diameter (20–200 nm) containing DNA were found to be released by transmission electron microscopy (TEM) and atomic force microscopy (AFM). An ass...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Scientific World Journal
2012
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3346689/ https://www.ncbi.nlm.nih.gov/pubmed/22593716 http://dx.doi.org/10.1100/2012/973436 |
_version_ | 1782232208994467840 |
---|---|
author | Sahu, Praveen K. Iyer, Pavithra S. Oak, Amrita M. Pardesi, Karishma R. Chopade, Balu A. |
author_facet | Sahu, Praveen K. Iyer, Pavithra S. Oak, Amrita M. Pardesi, Karishma R. Chopade, Balu A. |
author_sort | Sahu, Praveen K. |
collection | PubMed |
description | Release of extracellular DNA (eDNA) was observed during in vitro growth of a clinical strain of Acinetobacter baumannii. Membrane vesicles (MV) of varying diameter (20–200 nm) containing DNA were found to be released by transmission electron microscopy (TEM) and atomic force microscopy (AFM). An assessment of the characteristics of the eDNA with respect to size, digestion pattern by DNase I/restriction enzymes, and PCR-sequencing, indicates a high similarity with genomic DNA. Role of eDNA in static biofilm formed on polystyrene surface was evaluated by biofilm augmentation assay using eDNA available in different preparations, for example, whole cell lysate, cell-free supernatant, MV suspension, and purified eDNA. Biofilm augmentation was seen up to 224.64%, whereas biofilm inhibition was 59.41% after DNase I treatment: confirming that eDNA facilitates biofilm formation in A. baumannii. This is the first paper elucidating the characteristics and role of eDNA in A. baumannii biofilm, which may provide new insights into its pathogenesis. |
format | Online Article Text |
id | pubmed-3346689 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | The Scientific World Journal |
record_format | MEDLINE/PubMed |
spelling | pubmed-33466892012-05-16 Characterization of eDNA from the Clinical Strain Acinetobacter baumannii AIIMS 7 and Its Role in Biofilm Formation Sahu, Praveen K. Iyer, Pavithra S. Oak, Amrita M. Pardesi, Karishma R. Chopade, Balu A. ScientificWorldJournal Research Article Release of extracellular DNA (eDNA) was observed during in vitro growth of a clinical strain of Acinetobacter baumannii. Membrane vesicles (MV) of varying diameter (20–200 nm) containing DNA were found to be released by transmission electron microscopy (TEM) and atomic force microscopy (AFM). An assessment of the characteristics of the eDNA with respect to size, digestion pattern by DNase I/restriction enzymes, and PCR-sequencing, indicates a high similarity with genomic DNA. Role of eDNA in static biofilm formed on polystyrene surface was evaluated by biofilm augmentation assay using eDNA available in different preparations, for example, whole cell lysate, cell-free supernatant, MV suspension, and purified eDNA. Biofilm augmentation was seen up to 224.64%, whereas biofilm inhibition was 59.41% after DNase I treatment: confirming that eDNA facilitates biofilm formation in A. baumannii. This is the first paper elucidating the characteristics and role of eDNA in A. baumannii biofilm, which may provide new insights into its pathogenesis. The Scientific World Journal 2012-04-19 /pmc/articles/PMC3346689/ /pubmed/22593716 http://dx.doi.org/10.1100/2012/973436 Text en Copyright © 2012 Praveen K. Sahu et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Sahu, Praveen K. Iyer, Pavithra S. Oak, Amrita M. Pardesi, Karishma R. Chopade, Balu A. Characterization of eDNA from the Clinical Strain Acinetobacter baumannii AIIMS 7 and Its Role in Biofilm Formation |
title | Characterization of eDNA from the Clinical Strain Acinetobacter baumannii AIIMS 7 and Its Role in Biofilm Formation |
title_full | Characterization of eDNA from the Clinical Strain Acinetobacter baumannii AIIMS 7 and Its Role in Biofilm Formation |
title_fullStr | Characterization of eDNA from the Clinical Strain Acinetobacter baumannii AIIMS 7 and Its Role in Biofilm Formation |
title_full_unstemmed | Characterization of eDNA from the Clinical Strain Acinetobacter baumannii AIIMS 7 and Its Role in Biofilm Formation |
title_short | Characterization of eDNA from the Clinical Strain Acinetobacter baumannii AIIMS 7 and Its Role in Biofilm Formation |
title_sort | characterization of edna from the clinical strain acinetobacter baumannii aiims 7 and its role in biofilm formation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3346689/ https://www.ncbi.nlm.nih.gov/pubmed/22593716 http://dx.doi.org/10.1100/2012/973436 |
work_keys_str_mv | AT sahupraveenk characterizationofednafromtheclinicalstrainacinetobacterbaumanniiaiims7anditsroleinbiofilmformation AT iyerpavithras characterizationofednafromtheclinicalstrainacinetobacterbaumanniiaiims7anditsroleinbiofilmformation AT oakamritam characterizationofednafromtheclinicalstrainacinetobacterbaumanniiaiims7anditsroleinbiofilmformation AT pardesikarishmar characterizationofednafromtheclinicalstrainacinetobacterbaumanniiaiims7anditsroleinbiofilmformation AT chopadebalua characterizationofednafromtheclinicalstrainacinetobacterbaumanniiaiims7anditsroleinbiofilmformation |