Cargando…

Evaluation of the Utility of the Random Amplified Polymorphic DNA Method and of the Semi-Specific PCR to Assess the Genetic Diversification of the Gerbera jamesonii Bolus Line

An attempt was made to evaluate the utility of a method which employs semi-specific PCR using partially specific primers for the coding sequence (ET) at the exon-intron contact and of the RAPD method to identify eight Polish cultivars of gerbera. It was demonstrated that the PCR method which employs...

Descripción completa

Detalles Bibliográficos
Autores principales: Rusinowski, Zbigniew, Domeradzka, Olga
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Scientific World Journal 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3347477/
https://www.ncbi.nlm.nih.gov/pubmed/22593685
http://dx.doi.org/10.1100/2012/450920
_version_ 1782232276882423808
author Rusinowski, Zbigniew
Domeradzka, Olga
author_facet Rusinowski, Zbigniew
Domeradzka, Olga
author_sort Rusinowski, Zbigniew
collection PubMed
description An attempt was made to evaluate the utility of a method which employs semi-specific PCR using partially specific primers for the coding sequence (ET) at the exon-intron contact and of the RAPD method to identify eight Polish cultivars of gerbera. It was demonstrated that the PCR method which employs semi-specific primers is as simple and economical as the RAPD method, simultaneously the images of the multiplied by means of the semi-specific PCR method DNA fragments are more complex and polymorphic than those obtained through the RAPD method. The studies of the genetic diversification of Gerbera cultivars employing the aforementioned methods made it possible to conduct a concentration analysis and evaluation of the genetic distance between the lines, manifesting at the same time the superiority of the semi-random PCR method. Moreover, it transpired that the use of mixtures of RAPD primers not always leads to an increase of the number of generated polymorphic bands.
format Online
Article
Text
id pubmed-3347477
institution National Center for Biotechnology Information
language English
publishDate 2012
publisher The Scientific World Journal
record_format MEDLINE/PubMed
spelling pubmed-33474772012-05-16 Evaluation of the Utility of the Random Amplified Polymorphic DNA Method and of the Semi-Specific PCR to Assess the Genetic Diversification of the Gerbera jamesonii Bolus Line Rusinowski, Zbigniew Domeradzka, Olga ScientificWorldJournal Research Article An attempt was made to evaluate the utility of a method which employs semi-specific PCR using partially specific primers for the coding sequence (ET) at the exon-intron contact and of the RAPD method to identify eight Polish cultivars of gerbera. It was demonstrated that the PCR method which employs semi-specific primers is as simple and economical as the RAPD method, simultaneously the images of the multiplied by means of the semi-specific PCR method DNA fragments are more complex and polymorphic than those obtained through the RAPD method. The studies of the genetic diversification of Gerbera cultivars employing the aforementioned methods made it possible to conduct a concentration analysis and evaluation of the genetic distance between the lines, manifesting at the same time the superiority of the semi-random PCR method. Moreover, it transpired that the use of mixtures of RAPD primers not always leads to an increase of the number of generated polymorphic bands. The Scientific World Journal 2012-04-19 /pmc/articles/PMC3347477/ /pubmed/22593685 http://dx.doi.org/10.1100/2012/450920 Text en Copyright © 2012 Z. Rusinowski and O. Domeradzka. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Rusinowski, Zbigniew
Domeradzka, Olga
Evaluation of the Utility of the Random Amplified Polymorphic DNA Method and of the Semi-Specific PCR to Assess the Genetic Diversification of the Gerbera jamesonii Bolus Line
title Evaluation of the Utility of the Random Amplified Polymorphic DNA Method and of the Semi-Specific PCR to Assess the Genetic Diversification of the Gerbera jamesonii Bolus Line
title_full Evaluation of the Utility of the Random Amplified Polymorphic DNA Method and of the Semi-Specific PCR to Assess the Genetic Diversification of the Gerbera jamesonii Bolus Line
title_fullStr Evaluation of the Utility of the Random Amplified Polymorphic DNA Method and of the Semi-Specific PCR to Assess the Genetic Diversification of the Gerbera jamesonii Bolus Line
title_full_unstemmed Evaluation of the Utility of the Random Amplified Polymorphic DNA Method and of the Semi-Specific PCR to Assess the Genetic Diversification of the Gerbera jamesonii Bolus Line
title_short Evaluation of the Utility of the Random Amplified Polymorphic DNA Method and of the Semi-Specific PCR to Assess the Genetic Diversification of the Gerbera jamesonii Bolus Line
title_sort evaluation of the utility of the random amplified polymorphic dna method and of the semi-specific pcr to assess the genetic diversification of the gerbera jamesonii bolus line
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3347477/
https://www.ncbi.nlm.nih.gov/pubmed/22593685
http://dx.doi.org/10.1100/2012/450920
work_keys_str_mv AT rusinowskizbigniew evaluationoftheutilityoftherandomamplifiedpolymorphicdnamethodandofthesemispecificpcrtoassessthegeneticdiversificationofthegerberajamesoniibolusline
AT domeradzkaolga evaluationoftheutilityoftherandomamplifiedpolymorphicdnamethodandofthesemispecificpcrtoassessthegeneticdiversificationofthegerberajamesoniibolusline