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Statistical organelle dissection of Arabidopsis guard cells using image database LIPS
To comprehensively grasp cell biological events in plant stomatal movement, we have captured microscopic images of guard cells with various organelles markers. The 28,530 serial optical sections of 930 pairs of Arabidopsis guard cells have been released as a new image database, named Live Images of...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3349934/ https://www.ncbi.nlm.nih.gov/pubmed/22582142 http://dx.doi.org/10.1038/srep00405 |
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author | Higaki, Takumi Kutsuna, Natsumaro Hosokawa, Yoichiroh Akita, Kae Ebine, Kazuo Ueda, Takashi Kondo, Noriaki Hasezawa, Seiichiro |
author_facet | Higaki, Takumi Kutsuna, Natsumaro Hosokawa, Yoichiroh Akita, Kae Ebine, Kazuo Ueda, Takashi Kondo, Noriaki Hasezawa, Seiichiro |
author_sort | Higaki, Takumi |
collection | PubMed |
description | To comprehensively grasp cell biological events in plant stomatal movement, we have captured microscopic images of guard cells with various organelles markers. The 28,530 serial optical sections of 930 pairs of Arabidopsis guard cells have been released as a new image database, named Live Images of Plant Stomata (LIPS). We visualized the average organellar distributions in guard cells using probabilistic mapping and image clustering techniques. The results indicated that actin microfilaments and endoplasmic reticulum (ER) are mainly localized to the dorsal side and connection regions of guard cells. Subtractive images of open and closed stomata showed distribution changes in intracellular structures, including the ER, during stomatal movement. Time-lapse imaging showed that similar ER distribution changes occurred during stomatal opening induced by light irradiation or femtosecond laser shots on neighboring epidermal cells, indicating that our image analysis approach has identified a novel ER relocation in stomatal opening. |
format | Online Article Text |
id | pubmed-3349934 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-33499342012-05-10 Statistical organelle dissection of Arabidopsis guard cells using image database LIPS Higaki, Takumi Kutsuna, Natsumaro Hosokawa, Yoichiroh Akita, Kae Ebine, Kazuo Ueda, Takashi Kondo, Noriaki Hasezawa, Seiichiro Sci Rep Article To comprehensively grasp cell biological events in plant stomatal movement, we have captured microscopic images of guard cells with various organelles markers. The 28,530 serial optical sections of 930 pairs of Arabidopsis guard cells have been released as a new image database, named Live Images of Plant Stomata (LIPS). We visualized the average organellar distributions in guard cells using probabilistic mapping and image clustering techniques. The results indicated that actin microfilaments and endoplasmic reticulum (ER) are mainly localized to the dorsal side and connection regions of guard cells. Subtractive images of open and closed stomata showed distribution changes in intracellular structures, including the ER, during stomatal movement. Time-lapse imaging showed that similar ER distribution changes occurred during stomatal opening induced by light irradiation or femtosecond laser shots on neighboring epidermal cells, indicating that our image analysis approach has identified a novel ER relocation in stomatal opening. Nature Publishing Group 2012-05-11 /pmc/articles/PMC3349934/ /pubmed/22582142 http://dx.doi.org/10.1038/srep00405 Text en Copyright © 2012, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-sa/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareALike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/ |
spellingShingle | Article Higaki, Takumi Kutsuna, Natsumaro Hosokawa, Yoichiroh Akita, Kae Ebine, Kazuo Ueda, Takashi Kondo, Noriaki Hasezawa, Seiichiro Statistical organelle dissection of Arabidopsis guard cells using image database LIPS |
title | Statistical organelle dissection of Arabidopsis guard cells using image database LIPS |
title_full | Statistical organelle dissection of Arabidopsis guard cells using image database LIPS |
title_fullStr | Statistical organelle dissection of Arabidopsis guard cells using image database LIPS |
title_full_unstemmed | Statistical organelle dissection of Arabidopsis guard cells using image database LIPS |
title_short | Statistical organelle dissection of Arabidopsis guard cells using image database LIPS |
title_sort | statistical organelle dissection of arabidopsis guard cells using image database lips |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3349934/ https://www.ncbi.nlm.nih.gov/pubmed/22582142 http://dx.doi.org/10.1038/srep00405 |
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