Cargando…

Statistical organelle dissection of Arabidopsis guard cells using image database LIPS

To comprehensively grasp cell biological events in plant stomatal movement, we have captured microscopic images of guard cells with various organelles markers. The 28,530 serial optical sections of 930 pairs of Arabidopsis guard cells have been released as a new image database, named Live Images of...

Descripción completa

Detalles Bibliográficos
Autores principales: Higaki, Takumi, Kutsuna, Natsumaro, Hosokawa, Yoichiroh, Akita, Kae, Ebine, Kazuo, Ueda, Takashi, Kondo, Noriaki, Hasezawa, Seiichiro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3349934/
https://www.ncbi.nlm.nih.gov/pubmed/22582142
http://dx.doi.org/10.1038/srep00405
_version_ 1782232572817833984
author Higaki, Takumi
Kutsuna, Natsumaro
Hosokawa, Yoichiroh
Akita, Kae
Ebine, Kazuo
Ueda, Takashi
Kondo, Noriaki
Hasezawa, Seiichiro
author_facet Higaki, Takumi
Kutsuna, Natsumaro
Hosokawa, Yoichiroh
Akita, Kae
Ebine, Kazuo
Ueda, Takashi
Kondo, Noriaki
Hasezawa, Seiichiro
author_sort Higaki, Takumi
collection PubMed
description To comprehensively grasp cell biological events in plant stomatal movement, we have captured microscopic images of guard cells with various organelles markers. The 28,530 serial optical sections of 930 pairs of Arabidopsis guard cells have been released as a new image database, named Live Images of Plant Stomata (LIPS). We visualized the average organellar distributions in guard cells using probabilistic mapping and image clustering techniques. The results indicated that actin microfilaments and endoplasmic reticulum (ER) are mainly localized to the dorsal side and connection regions of guard cells. Subtractive images of open and closed stomata showed distribution changes in intracellular structures, including the ER, during stomatal movement. Time-lapse imaging showed that similar ER distribution changes occurred during stomatal opening induced by light irradiation or femtosecond laser shots on neighboring epidermal cells, indicating that our image analysis approach has identified a novel ER relocation in stomatal opening.
format Online
Article
Text
id pubmed-3349934
institution National Center for Biotechnology Information
language English
publishDate 2012
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-33499342012-05-10 Statistical organelle dissection of Arabidopsis guard cells using image database LIPS Higaki, Takumi Kutsuna, Natsumaro Hosokawa, Yoichiroh Akita, Kae Ebine, Kazuo Ueda, Takashi Kondo, Noriaki Hasezawa, Seiichiro Sci Rep Article To comprehensively grasp cell biological events in plant stomatal movement, we have captured microscopic images of guard cells with various organelles markers. The 28,530 serial optical sections of 930 pairs of Arabidopsis guard cells have been released as a new image database, named Live Images of Plant Stomata (LIPS). We visualized the average organellar distributions in guard cells using probabilistic mapping and image clustering techniques. The results indicated that actin microfilaments and endoplasmic reticulum (ER) are mainly localized to the dorsal side and connection regions of guard cells. Subtractive images of open and closed stomata showed distribution changes in intracellular structures, including the ER, during stomatal movement. Time-lapse imaging showed that similar ER distribution changes occurred during stomatal opening induced by light irradiation or femtosecond laser shots on neighboring epidermal cells, indicating that our image analysis approach has identified a novel ER relocation in stomatal opening. Nature Publishing Group 2012-05-11 /pmc/articles/PMC3349934/ /pubmed/22582142 http://dx.doi.org/10.1038/srep00405 Text en Copyright © 2012, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-sa/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareALike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/
spellingShingle Article
Higaki, Takumi
Kutsuna, Natsumaro
Hosokawa, Yoichiroh
Akita, Kae
Ebine, Kazuo
Ueda, Takashi
Kondo, Noriaki
Hasezawa, Seiichiro
Statistical organelle dissection of Arabidopsis guard cells using image database LIPS
title Statistical organelle dissection of Arabidopsis guard cells using image database LIPS
title_full Statistical organelle dissection of Arabidopsis guard cells using image database LIPS
title_fullStr Statistical organelle dissection of Arabidopsis guard cells using image database LIPS
title_full_unstemmed Statistical organelle dissection of Arabidopsis guard cells using image database LIPS
title_short Statistical organelle dissection of Arabidopsis guard cells using image database LIPS
title_sort statistical organelle dissection of arabidopsis guard cells using image database lips
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3349934/
https://www.ncbi.nlm.nih.gov/pubmed/22582142
http://dx.doi.org/10.1038/srep00405
work_keys_str_mv AT higakitakumi statisticalorganelledissectionofarabidopsisguardcellsusingimagedatabaselips
AT kutsunanatsumaro statisticalorganelledissectionofarabidopsisguardcellsusingimagedatabaselips
AT hosokawayoichiroh statisticalorganelledissectionofarabidopsisguardcellsusingimagedatabaselips
AT akitakae statisticalorganelledissectionofarabidopsisguardcellsusingimagedatabaselips
AT ebinekazuo statisticalorganelledissectionofarabidopsisguardcellsusingimagedatabaselips
AT uedatakashi statisticalorganelledissectionofarabidopsisguardcellsusingimagedatabaselips
AT kondonoriaki statisticalorganelledissectionofarabidopsisguardcellsusingimagedatabaselips
AT hasezawaseiichiro statisticalorganelledissectionofarabidopsisguardcellsusingimagedatabaselips