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A New Way of Identifying Biomarkers in Biomedical Basic-Research Studies

A simple, nonparametric and distribution free method was developed for quick identification of the most meaningful biomarkers among a number of candidates in complex biological phenomena, especially in relatively small samples. This method is independent of rigid model forms or other link functions....

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Detalles Bibliográficos
Autores principales: Yassouridis, Alexander, Ludwig, Tonia, Steiger, Axel, Leisch, Friedrich
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3350515/
https://www.ncbi.nlm.nih.gov/pubmed/22606233
http://dx.doi.org/10.1371/journal.pone.0035741
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author Yassouridis, Alexander
Ludwig, Tonia
Steiger, Axel
Leisch, Friedrich
author_facet Yassouridis, Alexander
Ludwig, Tonia
Steiger, Axel
Leisch, Friedrich
author_sort Yassouridis, Alexander
collection PubMed
description A simple, nonparametric and distribution free method was developed for quick identification of the most meaningful biomarkers among a number of candidates in complex biological phenomena, especially in relatively small samples. This method is independent of rigid model forms or other link functions. It may be applied both to metric and non-metric data as well as to independent or matched parallel samples. With this method identification of the most relevant biomarkers is not based on inferential methods; therefore, its application does not require corrections of the level of significance, even in cases of thousands of variables. Hence, the introduced method is appropriate to analyze and evaluate data of complex investigations in clinical and pre-clinical basic research, such as gene or protein expressions, phenotype-genotype associations in case-control studies on the basis of thousands of genes and SNPs (single nucleotide polymorphism), search of prevalence in sleep EEG-Data, functional magnetic resonance imaging (fMRI) or others.
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spelling pubmed-33505152012-05-17 A New Way of Identifying Biomarkers in Biomedical Basic-Research Studies Yassouridis, Alexander Ludwig, Tonia Steiger, Axel Leisch, Friedrich PLoS One Research Article A simple, nonparametric and distribution free method was developed for quick identification of the most meaningful biomarkers among a number of candidates in complex biological phenomena, especially in relatively small samples. This method is independent of rigid model forms or other link functions. It may be applied both to metric and non-metric data as well as to independent or matched parallel samples. With this method identification of the most relevant biomarkers is not based on inferential methods; therefore, its application does not require corrections of the level of significance, even in cases of thousands of variables. Hence, the introduced method is appropriate to analyze and evaluate data of complex investigations in clinical and pre-clinical basic research, such as gene or protein expressions, phenotype-genotype associations in case-control studies on the basis of thousands of genes and SNPs (single nucleotide polymorphism), search of prevalence in sleep EEG-Data, functional magnetic resonance imaging (fMRI) or others. Public Library of Science 2012-05-11 /pmc/articles/PMC3350515/ /pubmed/22606233 http://dx.doi.org/10.1371/journal.pone.0035741 Text en Yassouridis et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Yassouridis, Alexander
Ludwig, Tonia
Steiger, Axel
Leisch, Friedrich
A New Way of Identifying Biomarkers in Biomedical Basic-Research Studies
title A New Way of Identifying Biomarkers in Biomedical Basic-Research Studies
title_full A New Way of Identifying Biomarkers in Biomedical Basic-Research Studies
title_fullStr A New Way of Identifying Biomarkers in Biomedical Basic-Research Studies
title_full_unstemmed A New Way of Identifying Biomarkers in Biomedical Basic-Research Studies
title_short A New Way of Identifying Biomarkers in Biomedical Basic-Research Studies
title_sort new way of identifying biomarkers in biomedical basic-research studies
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3350515/
https://www.ncbi.nlm.nih.gov/pubmed/22606233
http://dx.doi.org/10.1371/journal.pone.0035741
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