Cargando…

Deep Sequencing of Small RNAs in Tomato for Virus and Viroid Identification and Strain Differentiation

Small RNAs (sRNA), including microRNAs (miRNA) and small interfering RNAs (siRNA), are produced abundantly in plants and animals and function in regulating gene expression or in defense against virus or viroid infection. Analysis of siRNA profiles upon virus infection in plant may allow for virus id...

Descripción completa

Detalles Bibliográficos
Autores principales:	Li, Rugang, Gao, Shan, Hernandez, Alvaro G., Wechter, W. Patrick, Fei, Zhangjun, Ling, Kai-Shu
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2012
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3356388/ https://www.ncbi.nlm.nih.gov/pubmed/22623984 http://dx.doi.org/10.1371/journal.pone.0037127

Ejemplares similares

Evaluation of disinfectants to prevent mechanical transmission of viruses and a viroid in greenhouse tomato production
por: Li, Rugang, et al.
Publicado: (2015)

Complete Genome Sequence of a New Tobamovirus Naturally Infecting Tomatoes in Mexico
por: Li, Rugang, et al.
Publicado: (2013)

Complete Genome Sequence of Southern tomato virus Naturally Infecting Tomatoes in Bangladesh
por: Padmanabhan, Chellappan, et al.
Publicado: (2015)

Complete Genome Sequence of a Tomato-Infecting Tomato Mottle Mosaic Virus in New York
por: Padmanabhan, Chellappan, et al.
Publicado: (2015)

Analysis of Sequence Polymorphism and Population Structure of Tomato chlorotic dwarf viroid and Potato spindle tuber viroid in Viroid-Infected Tomato Plants
por: Nie, Xianzhou
Publicado: (2012)

Deep Sequencing of Viroid-Derived Small RNAs from Grapevine Provides New Insights on the Role of RNA Silencing in Plant-Viroid Interaction
por: Navarro, Beatriz, et al.
Publicado: (2009)

Identification of Hop stunt viroid infecting Citrus limon in China using small RNAs deep sequencing approach
por: Su, Xiu, et al.
Publicado: (2015)

Identification of Viruses and Viroids Infecting Tomato and Pepper Plants in Vietnam by Metatranscriptomics
por: Choi, Hoseong, et al.
Publicado: (2020)

Complete Genome Sequence of Southern tomato virus Identified in China Using Next-Generation Sequencing
por: Padmanabhan, Chellappan, et al.
Publicado: (2015)

On the early identification and characterization of pear blister canker viroid, apple dimple fruit viroid, peach latent mosaic viroid and chrysanthemum chlorotic mottle viroid
por: Navarro, Beatriz, et al.
Publicado: (2022)

Citrus exocortis viroid causes ribosomal stress in tomato plants
por: Cottilli, Patrick, et al.
Publicado: (2019)

Deep Sequencing of Small RNAs in the Whitefly Bemisia tabaci Reveals Novel MicroRNAs Potentially Associated with Begomovirus Acquisition and Transmission
por: Hasegawa, Daniel K., et al.
Publicado: (2020)

Viroid-infected Tomato and Capsicum Seed Shipments to Australia
por: Constable, Fiona, et al.
Publicado: (2019)

Viroid‐derived small RNA induces early flowering in tomato plants by RNA silencing
por: Adkar‐Purushothama, Charith Raj, et al.
Publicado: (2018)

Viroids and Viroid-like Circular RNAs: Do They Descend from Primordial Replicators?
por: Lee, Benjamin D., et al.
Publicado: (2022)

Viroids and viroid diseases /
por: Diener, T. O. (Theodor Otto), 1921-
Publicado: (1979)

Complete Genome Sequence of a Novel Genotype of Squash Mosaic Virus Infecting Squash in Spain
por: Li, Rugang, et al.
Publicado: (2015)

Viroids: “living fossils” of primordial RNAs?
por: Diener, Theodor O.
Publicado: (2016)

RNAi mediated inhibition of viroid infection in transgenic plants expressing viroid-specific small RNAs derived from various functional domains
por: Adkar-Purushothama, Charith Raj, et al.
Publicado: (2015)

λ-Carrageenan Suppresses Tomato Chlorotic Dwarf Viroid (TCDVd) Replication and Symptom Expression in Tomatoes
por: Sangha, Jatinder S., et al.
Publicado: (2015)

Complete Genome Sequence of an Emerging Melon Necrotic Spot Virus Isolate Infecting Greenhouse Cucumber in North America
por: Li, Rugang, et al.
Publicado: (2015)

First Complete Genome Sequence of an Emerging Cucumber Green Mottle Mosaic Virus Isolate in North America
por: Li, Rugang, et al.
Publicado: (2015)

Artificial microRNAs and synthetic trans‐acting small interfering RNAs interfere with viroid infection
por: Carbonell, Alberto, et al.
Publicado: (2017)

Effect of Benzothiadiazole on the Metabolome of Tomato Plants Infected by Citrus Exocortis Viroid
por: López-Gresa, María Pilar, et al.
Publicado: (2019)

High-Throughput Sequencing of Small RNAs for Diagnostics of Grapevine Viruses and Viroids in Russia
por: Navrotskaya, Emiliya, et al.
Publicado: (2021)

Deep Sequencing of the Small RNAs Derived from Two Symptomatic Variants of a Chloroplastic Viroid: Implications for Their Genesis and for Pathogenesis
por: Di Serio, Francesco, et al.
Publicado: (2009)

Complete Genome Sequence of an Emerging Genotype of Tobacco Streak Virus in the United States
por: Padmanabhan, Chellappan, et al.
Publicado: (2014)

Analysis of small RNA production patterns among the two potato spindle tuber viroid variants in tomato plants
por: Adkar-Purushothama, Charith Raj, et al.
Publicado: (2015)

High-Throughput Sequencing Analysis of Small RNAs Derived from Coleus Blumei Viroids
por: Jiang, Dong-Mei, et al.
Publicado: (2019)

Tolerance Even to Lethal Strain of Potato Spindle Tuber Viroid Found in Wild Tomato Species Can Be Introduced by Crossing
por: Naoi, Takashi, et al.
Publicado: (2021)

Innate Immunity Activation and RNAi Interplay in Citrus Exocortis Viroid—Tomato Pathosystem
por: Olivier, Thibaut, et al.
Publicado: (2018)

Scion on a Stock Producing siRNAs of Potato Spindle Tuber Viroid (PSTVd) Attenuates Accumulation of the Viroid
por: Kasai, Atsushi, et al.
Publicado: (2013)

Salicylic Acid Is Involved in the Basal Resistance of Tomato Plants to Citrus Exocortis Viroid and Tomato Spotted Wilt Virus
por: López-Gresa, M. Pilar, et al.
Publicado: (2016)

Identification of novel small ncRNAs in pollen of tomato
por: Bokszczanin, Kamila Lucia, et al.
Publicado: (2015)

A scenario for the emergence of protoviroids in the RNA world and for their further evolution into viroids and viroid-like RNAs by modular recombinations and mutations
por: Flores, Ricardo, et al.
Publicado: (2022)

Using Small RNA-seq Data to Detect siRNA Duplexes Induced by Plant Viruses
por: Niu, Xiaoran, et al.
Publicado: (2017)

Virus and Viroid-Derived Small RNAs as Modulators of Host Gene Expression: Molecular Insights Into Pathogenesis
por: Ramesh, S. V., et al.
Publicado: (2021)

Complete Genome Sequences of Tomato Leaf Curl Guam Virus, a Novel Tomato-Infecting Begomovirus from Guam, USA
por: Schlub, Robert L., et al.
Publicado: (2021)

Degradome Analysis of Tomato and Nicotiana benthamiana Plants Infected with Potato Spindle Tuber Viroid
por: Navarro, Beatriz, et al.
Publicado: (2021)

Identification and expression profiling of microRNAs involved in the stigma exsertion under high-temperature stress in tomato
por: Pan, Changtian, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_ju50j5etvfbgqjql2298egh44q