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Mutation at the Human D1S80 Minisatellite Locus

Little is known about the general biology of minisatellites. The purpose of this study is to examine repeat mutations from the D1S80 minisatellite locus by sequence analysis to elucidate the mutational process at this locus. This is a highly polymorphic minisatellite locus, located in the subtelomer...

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Autores principales: Balamurugan, Kuppareddi, Tracey, Martin L., Heine, Uwe, Maha, George C., Duncan, George T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Scientific World Journal 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3356730/
https://www.ncbi.nlm.nih.gov/pubmed/22645469
http://dx.doi.org/10.1100/2012/917235
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author Balamurugan, Kuppareddi
Tracey, Martin L.
Heine, Uwe
Maha, George C.
Duncan, George T.
author_facet Balamurugan, Kuppareddi
Tracey, Martin L.
Heine, Uwe
Maha, George C.
Duncan, George T.
author_sort Balamurugan, Kuppareddi
collection PubMed
description Little is known about the general biology of minisatellites. The purpose of this study is to examine repeat mutations from the D1S80 minisatellite locus by sequence analysis to elucidate the mutational process at this locus. This is a highly polymorphic minisatellite locus, located in the subtelomeric region of chromosome 1. We have analyzed 90,000 human germline transmission events and found seven (7) mutations at this locus. The D1S80 alleles of the parentage trio, the child, mother, and the alleged father were sequenced and the origin of the mutation was determined. Using American Association of Blood Banks (AABB) guidelines, we found a male mutation rate of 1.04 × 10(−4) and a female mutation rate of 5.18 × 10(−5) with an overall mutation rate of approximately 7.77 × 10(−5). Also, in this study, we found that the identified mutations are in close proximity to the center of the repeat array rather than at the ends of the repeat array. Several studies have examined the mutational mechanisms of the minisatellites according to infinite allele model (IAM) and the one-step stepwise mutation model (SMM). In this study, we found that this locus fits into the one-step mutation model (SMM) mechanism in six out of seven instances similar to STR loci.
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spelling pubmed-33567302012-05-29 Mutation at the Human D1S80 Minisatellite Locus Balamurugan, Kuppareddi Tracey, Martin L. Heine, Uwe Maha, George C. Duncan, George T. ScientificWorldJournal Research Article Little is known about the general biology of minisatellites. The purpose of this study is to examine repeat mutations from the D1S80 minisatellite locus by sequence analysis to elucidate the mutational process at this locus. This is a highly polymorphic minisatellite locus, located in the subtelomeric region of chromosome 1. We have analyzed 90,000 human germline transmission events and found seven (7) mutations at this locus. The D1S80 alleles of the parentage trio, the child, mother, and the alleged father were sequenced and the origin of the mutation was determined. Using American Association of Blood Banks (AABB) guidelines, we found a male mutation rate of 1.04 × 10(−4) and a female mutation rate of 5.18 × 10(−5) with an overall mutation rate of approximately 7.77 × 10(−5). Also, in this study, we found that the identified mutations are in close proximity to the center of the repeat array rather than at the ends of the repeat array. Several studies have examined the mutational mechanisms of the minisatellites according to infinite allele model (IAM) and the one-step stepwise mutation model (SMM). In this study, we found that this locus fits into the one-step mutation model (SMM) mechanism in six out of seven instances similar to STR loci. The Scientific World Journal 2012-05-03 /pmc/articles/PMC3356730/ /pubmed/22645469 http://dx.doi.org/10.1100/2012/917235 Text en Copyright © 2012 Kuppareddi Balamurugan et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Balamurugan, Kuppareddi
Tracey, Martin L.
Heine, Uwe
Maha, George C.
Duncan, George T.
Mutation at the Human D1S80 Minisatellite Locus
title Mutation at the Human D1S80 Minisatellite Locus
title_full Mutation at the Human D1S80 Minisatellite Locus
title_fullStr Mutation at the Human D1S80 Minisatellite Locus
title_full_unstemmed Mutation at the Human D1S80 Minisatellite Locus
title_short Mutation at the Human D1S80 Minisatellite Locus
title_sort mutation at the human d1s80 minisatellite locus
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3356730/
https://www.ncbi.nlm.nih.gov/pubmed/22645469
http://dx.doi.org/10.1100/2012/917235
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