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Template-Cut: A Pattern-Based Segmentation Paradigm
We present a scale-invariant, template-based segmentation paradigm that sets up a graph and performs a graph cut to separate an object from the background. Typically graph-based schemes distribute the nodes of the graph uniformly and equidistantly on the image, and use a regularizer to bias the cut...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3359527/ https://www.ncbi.nlm.nih.gov/pubmed/22639728 http://dx.doi.org/10.1038/srep00420 |
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author | Egger, Jan Freisleben, Bernd Nimsky, Christopher Kapur, Tina |
author_facet | Egger, Jan Freisleben, Bernd Nimsky, Christopher Kapur, Tina |
author_sort | Egger, Jan |
collection | PubMed |
description | We present a scale-invariant, template-based segmentation paradigm that sets up a graph and performs a graph cut to separate an object from the background. Typically graph-based schemes distribute the nodes of the graph uniformly and equidistantly on the image, and use a regularizer to bias the cut towards a particular shape. The strategy of uniform and equidistant nodes does not allow the cut to prefer more complex structures, especially when areas of the object are indistinguishable from the background. We propose a solution by introducing the concept of a “template shape” of the target object in which the nodes are sampled non-uniformly and non-equidistantly on the image. We evaluate it on 2D-images where the object's textures and backgrounds are similar, and large areas of the object have the same gray level appearance as the background. We also evaluate it in 3D on 60 brain tumor datasets for neurosurgical planning purposes. |
format | Online Article Text |
id | pubmed-3359527 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-33595272012-05-25 Template-Cut: A Pattern-Based Segmentation Paradigm Egger, Jan Freisleben, Bernd Nimsky, Christopher Kapur, Tina Sci Rep Article We present a scale-invariant, template-based segmentation paradigm that sets up a graph and performs a graph cut to separate an object from the background. Typically graph-based schemes distribute the nodes of the graph uniformly and equidistantly on the image, and use a regularizer to bias the cut towards a particular shape. The strategy of uniform and equidistant nodes does not allow the cut to prefer more complex structures, especially when areas of the object are indistinguishable from the background. We propose a solution by introducing the concept of a “template shape” of the target object in which the nodes are sampled non-uniformly and non-equidistantly on the image. We evaluate it on 2D-images where the object's textures and backgrounds are similar, and large areas of the object have the same gray level appearance as the background. We also evaluate it in 3D on 60 brain tumor datasets for neurosurgical planning purposes. Nature Publishing Group 2012-05-24 /pmc/articles/PMC3359527/ /pubmed/22639728 http://dx.doi.org/10.1038/srep00420 Text en Copyright © 2012, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-sa/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareALike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/ |
spellingShingle | Article Egger, Jan Freisleben, Bernd Nimsky, Christopher Kapur, Tina Template-Cut: A Pattern-Based Segmentation Paradigm |
title | Template-Cut: A Pattern-Based Segmentation Paradigm |
title_full | Template-Cut: A Pattern-Based Segmentation Paradigm |
title_fullStr | Template-Cut: A Pattern-Based Segmentation Paradigm |
title_full_unstemmed | Template-Cut: A Pattern-Based Segmentation Paradigm |
title_short | Template-Cut: A Pattern-Based Segmentation Paradigm |
title_sort | template-cut: a pattern-based segmentation paradigm |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3359527/ https://www.ncbi.nlm.nih.gov/pubmed/22639728 http://dx.doi.org/10.1038/srep00420 |
work_keys_str_mv | AT eggerjan templatecutapatternbasedsegmentationparadigm AT freislebenbernd templatecutapatternbasedsegmentationparadigm AT nimskychristopher templatecutapatternbasedsegmentationparadigm AT kapurtina templatecutapatternbasedsegmentationparadigm |