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A Stochastic Description of Dictyostelium Chemotaxis
Chemotaxis, the directed motion of a cell toward a chemical source, plays a key role in many essential biological processes. Here, we derive a statistical model that quantitatively describes the chemotactic motion of eukaryotic cells in a chemical gradient. Our model is based on observations of the...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3360683/ https://www.ncbi.nlm.nih.gov/pubmed/22662138 http://dx.doi.org/10.1371/journal.pone.0037213 |
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author | Amselem, Gabriel Theves, Matthias Bae, Albert Bodenschatz, Eberhard Beta, Carsten |
author_facet | Amselem, Gabriel Theves, Matthias Bae, Albert Bodenschatz, Eberhard Beta, Carsten |
author_sort | Amselem, Gabriel |
collection | PubMed |
description | Chemotaxis, the directed motion of a cell toward a chemical source, plays a key role in many essential biological processes. Here, we derive a statistical model that quantitatively describes the chemotactic motion of eukaryotic cells in a chemical gradient. Our model is based on observations of the chemotactic motion of the social ameba Dictyostelium discoideum, a model organism for eukaryotic chemotaxis. A large number of cell trajectories in stationary, linear chemoattractant gradients is measured, using microfluidic tools in combination with automated cell tracking. We describe the directional motion as the interplay between deterministic and stochastic contributions based on a Langevin equation. The functional form of this equation is directly extracted from experimental data by angle-resolved conditional averages. It contains quadratic deterministic damping and multiplicative noise. In the presence of an external gradient, the deterministic part shows a clear angular dependence that takes the form of a force pointing in gradient direction. With increasing gradient steepness, this force passes through a maximum that coincides with maxima in both speed and directionality of the cells. The stochastic part, on the other hand, does not depend on the orientation of the directional cue and remains independent of the gradient magnitude. Numerical simulations of our probabilistic model yield quantitative agreement with the experimental distribution functions. Thus our model captures well the dynamics of chemotactic cells and can serve to quantify differences and similarities of different chemotactic eukaryotes. Finally, on the basis of our model, we can characterize the heterogeneity within a population of chemotactic cells. |
format | Online Article Text |
id | pubmed-3360683 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-33606832012-06-01 A Stochastic Description of Dictyostelium Chemotaxis Amselem, Gabriel Theves, Matthias Bae, Albert Bodenschatz, Eberhard Beta, Carsten PLoS One Research Article Chemotaxis, the directed motion of a cell toward a chemical source, plays a key role in many essential biological processes. Here, we derive a statistical model that quantitatively describes the chemotactic motion of eukaryotic cells in a chemical gradient. Our model is based on observations of the chemotactic motion of the social ameba Dictyostelium discoideum, a model organism for eukaryotic chemotaxis. A large number of cell trajectories in stationary, linear chemoattractant gradients is measured, using microfluidic tools in combination with automated cell tracking. We describe the directional motion as the interplay between deterministic and stochastic contributions based on a Langevin equation. The functional form of this equation is directly extracted from experimental data by angle-resolved conditional averages. It contains quadratic deterministic damping and multiplicative noise. In the presence of an external gradient, the deterministic part shows a clear angular dependence that takes the form of a force pointing in gradient direction. With increasing gradient steepness, this force passes through a maximum that coincides with maxima in both speed and directionality of the cells. The stochastic part, on the other hand, does not depend on the orientation of the directional cue and remains independent of the gradient magnitude. Numerical simulations of our probabilistic model yield quantitative agreement with the experimental distribution functions. Thus our model captures well the dynamics of chemotactic cells and can serve to quantify differences and similarities of different chemotactic eukaryotes. Finally, on the basis of our model, we can characterize the heterogeneity within a population of chemotactic cells. Public Library of Science 2012-05-25 /pmc/articles/PMC3360683/ /pubmed/22662138 http://dx.doi.org/10.1371/journal.pone.0037213 Text en Amselem et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Amselem, Gabriel Theves, Matthias Bae, Albert Bodenschatz, Eberhard Beta, Carsten A Stochastic Description of Dictyostelium Chemotaxis |
title | A Stochastic Description of Dictyostelium Chemotaxis |
title_full | A Stochastic Description of Dictyostelium Chemotaxis |
title_fullStr | A Stochastic Description of Dictyostelium Chemotaxis |
title_full_unstemmed | A Stochastic Description of Dictyostelium Chemotaxis |
title_short | A Stochastic Description of Dictyostelium Chemotaxis |
title_sort | stochastic description of dictyostelium chemotaxis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3360683/ https://www.ncbi.nlm.nih.gov/pubmed/22662138 http://dx.doi.org/10.1371/journal.pone.0037213 |
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