Cargando…
Parameter-sweeping techniques for temporal dynamics of neuronal systems: case study of Hindmarsh-Rose model
BACKGROUND: Development of effective and plausible numerical tools is an imperative task for thorough studies of nonlinear dynamics in life science applications. RESULTS: We have developed a complementary suite of computational tools for two-parameter screening of dynamics in neuronal models. We tes...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer
2011
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3365907/ https://www.ncbi.nlm.nih.gov/pubmed/22656867 http://dx.doi.org/10.1186/2190-8567-1-6 |
_version_ | 1782234703317696512 |
---|---|
author | Barrio, Roberto Shilnikov, Andrey |
author_facet | Barrio, Roberto Shilnikov, Andrey |
author_sort | Barrio, Roberto |
collection | PubMed |
description | BACKGROUND: Development of effective and plausible numerical tools is an imperative task for thorough studies of nonlinear dynamics in life science applications. RESULTS: We have developed a complementary suite of computational tools for two-parameter screening of dynamics in neuronal models. We test a ‘brute-force’ effectiveness of neuroscience plausible techniques specifically tailored for the examination of temporal characteristics, such duty cycle of bursting, interspike interval, spike number deviation in the phenomenological Hindmarsh-Rose model of a bursting neuron and compare the results obtained by calculus-based tools for evaluations of an entire spectrum of Lyapunov exponents broadly employed in studies of nonlinear systems. CONCLUSIONS: We have found that the results obtained either way agree exceptionally well, and can identify and differentiate between various fine structures of complex dynamics and underlying global bifurcations in this exemplary model. Our future planes are to enhance the applicability of this computational suite for understanding of polyrhythmic bursting patterns and their functional transformations in small networks. |
format | Online Article Text |
id | pubmed-3365907 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Springer |
record_format | MEDLINE/PubMed |
spelling | pubmed-33659072012-06-05 Parameter-sweeping techniques for temporal dynamics of neuronal systems: case study of Hindmarsh-Rose model Barrio, Roberto Shilnikov, Andrey J Math Neurosci Research BACKGROUND: Development of effective and plausible numerical tools is an imperative task for thorough studies of nonlinear dynamics in life science applications. RESULTS: We have developed a complementary suite of computational tools for two-parameter screening of dynamics in neuronal models. We test a ‘brute-force’ effectiveness of neuroscience plausible techniques specifically tailored for the examination of temporal characteristics, such duty cycle of bursting, interspike interval, spike number deviation in the phenomenological Hindmarsh-Rose model of a bursting neuron and compare the results obtained by calculus-based tools for evaluations of an entire spectrum of Lyapunov exponents broadly employed in studies of nonlinear systems. CONCLUSIONS: We have found that the results obtained either way agree exceptionally well, and can identify and differentiate between various fine structures of complex dynamics and underlying global bifurcations in this exemplary model. Our future planes are to enhance the applicability of this computational suite for understanding of polyrhythmic bursting patterns and their functional transformations in small networks. Springer 2011-07-11 /pmc/articles/PMC3365907/ /pubmed/22656867 http://dx.doi.org/10.1186/2190-8567-1-6 Text en Copyright © 2011 Barrio, Shilnikov; licensee Springer https://creativecommons.org/licenses/by/2.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0 (https://creativecommons.org/licenses/by/2.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Barrio, Roberto Shilnikov, Andrey Parameter-sweeping techniques for temporal dynamics of neuronal systems: case study of Hindmarsh-Rose model |
title | Parameter-sweeping techniques for temporal dynamics of neuronal systems: case study of Hindmarsh-Rose model |
title_full | Parameter-sweeping techniques for temporal dynamics of neuronal systems: case study of Hindmarsh-Rose model |
title_fullStr | Parameter-sweeping techniques for temporal dynamics of neuronal systems: case study of Hindmarsh-Rose model |
title_full_unstemmed | Parameter-sweeping techniques for temporal dynamics of neuronal systems: case study of Hindmarsh-Rose model |
title_short | Parameter-sweeping techniques for temporal dynamics of neuronal systems: case study of Hindmarsh-Rose model |
title_sort | parameter-sweeping techniques for temporal dynamics of neuronal systems: case study of hindmarsh-rose model |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3365907/ https://www.ncbi.nlm.nih.gov/pubmed/22656867 http://dx.doi.org/10.1186/2190-8567-1-6 |
work_keys_str_mv | AT barrioroberto parametersweepingtechniquesfortemporaldynamicsofneuronalsystemscasestudyofhindmarshrosemodel AT shilnikovandrey parametersweepingtechniquesfortemporaldynamicsofneuronalsystemscasestudyofhindmarshrosemodel |