Cargando…

Complete genome sequence of Allochromatium vinosum DSM 180(T)

Allochromatium vinosum formerly Chromatium vinosum is a mesophilic purple sulfur bacterium belonging to the family Chromatiaceae in the bacterial class Gammaproteobacteria. The genus Allochromatium contains currently five species. All members were isolated from freshwater, brackish water or marine h...

Descripción completa

Detalles Bibliográficos
Autores principales: Weissgerber, Thomas, Zigann, Renate, Bruce, David, Chang, Yun-juan, Detter, John C., Han, Cliff, Hauser, Loren, Jeffries, Cynthia D., Land, Miriam, Munk, A. Christine, Tapia, Roxanne, Dahl, Christiane
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3368242/
https://www.ncbi.nlm.nih.gov/pubmed/22675582
http://dx.doi.org/10.4056/sigs.2335270
_version_ 1782234926508146688
author Weissgerber, Thomas
Zigann, Renate
Bruce, David
Chang, Yun-juan
Detter, John C.
Han, Cliff
Hauser, Loren
Jeffries, Cynthia D.
Land, Miriam
Munk, A. Christine
Tapia, Roxanne
Dahl, Christiane
author_facet Weissgerber, Thomas
Zigann, Renate
Bruce, David
Chang, Yun-juan
Detter, John C.
Han, Cliff
Hauser, Loren
Jeffries, Cynthia D.
Land, Miriam
Munk, A. Christine
Tapia, Roxanne
Dahl, Christiane
author_sort Weissgerber, Thomas
collection PubMed
description Allochromatium vinosum formerly Chromatium vinosum is a mesophilic purple sulfur bacterium belonging to the family Chromatiaceae in the bacterial class Gammaproteobacteria. The genus Allochromatium contains currently five species. All members were isolated from freshwater, brackish water or marine habitats and are predominately obligate phototrophs. Here we describe the features of the organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a member of the Chromatiaceae within the purple sulfur bacteria thriving in globally occurring habitats. The 3,669,074 bp genome with its 3,302 protein-coding and 64 RNA genes was sequenced within the Joint Genome Institute Community Sequencing Program.
format Online
Article
Text
id pubmed-3368242
institution National Center for Biotechnology Information
language English
publishDate 2011
publisher Michigan State University
record_format MEDLINE/PubMed
spelling pubmed-33682422012-06-06 Complete genome sequence of Allochromatium vinosum DSM 180(T) Weissgerber, Thomas Zigann, Renate Bruce, David Chang, Yun-juan Detter, John C. Han, Cliff Hauser, Loren Jeffries, Cynthia D. Land, Miriam Munk, A. Christine Tapia, Roxanne Dahl, Christiane Stand Genomic Sci Short Genome Reports Allochromatium vinosum formerly Chromatium vinosum is a mesophilic purple sulfur bacterium belonging to the family Chromatiaceae in the bacterial class Gammaproteobacteria. The genus Allochromatium contains currently five species. All members were isolated from freshwater, brackish water or marine habitats and are predominately obligate phototrophs. Here we describe the features of the organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a member of the Chromatiaceae within the purple sulfur bacteria thriving in globally occurring habitats. The 3,669,074 bp genome with its 3,302 protein-coding and 64 RNA genes was sequenced within the Joint Genome Institute Community Sequencing Program. Michigan State University 2011-12-22 /pmc/articles/PMC3368242/ /pubmed/22675582 http://dx.doi.org/10.4056/sigs.2335270 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Weissgerber, Thomas
Zigann, Renate
Bruce, David
Chang, Yun-juan
Detter, John C.
Han, Cliff
Hauser, Loren
Jeffries, Cynthia D.
Land, Miriam
Munk, A. Christine
Tapia, Roxanne
Dahl, Christiane
Complete genome sequence of Allochromatium vinosum DSM 180(T)
title Complete genome sequence of Allochromatium vinosum DSM 180(T)
title_full Complete genome sequence of Allochromatium vinosum DSM 180(T)
title_fullStr Complete genome sequence of Allochromatium vinosum DSM 180(T)
title_full_unstemmed Complete genome sequence of Allochromatium vinosum DSM 180(T)
title_short Complete genome sequence of Allochromatium vinosum DSM 180(T)
title_sort complete genome sequence of allochromatium vinosum dsm 180(t)
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3368242/
https://www.ncbi.nlm.nih.gov/pubmed/22675582
http://dx.doi.org/10.4056/sigs.2335270
work_keys_str_mv AT weissgerberthomas completegenomesequenceofallochromatiumvinosumdsm180t
AT zigannrenate completegenomesequenceofallochromatiumvinosumdsm180t
AT brucedavid completegenomesequenceofallochromatiumvinosumdsm180t
AT changyunjuan completegenomesequenceofallochromatiumvinosumdsm180t
AT detterjohnc completegenomesequenceofallochromatiumvinosumdsm180t
AT hancliff completegenomesequenceofallochromatiumvinosumdsm180t
AT hauserloren completegenomesequenceofallochromatiumvinosumdsm180t
AT jeffriescynthiad completegenomesequenceofallochromatiumvinosumdsm180t
AT landmiriam completegenomesequenceofallochromatiumvinosumdsm180t
AT munkachristine completegenomesequenceofallochromatiumvinosumdsm180t
AT tapiaroxanne completegenomesequenceofallochromatiumvinosumdsm180t
AT dahlchristiane completegenomesequenceofallochromatiumvinosumdsm180t