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Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney

Marinithermus hydrothermalis Sako et al. 2003 is the type species of the monotypic genus Marinithermus. M. hydrothermalis T1(T) was the first isolate within the phylum “Thermus-Deinococcus” to exhibit optimal growth under a salinity equivalent to that of sea water and to have an absolute requirement...

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Autores principales: Copeland, Alex, Gu, Wei, Yasawong, Montri, Lapidus, Alla, Lucas, Susan, Deshpande, Shweta, Pagani, Ioanna, Tapia, Roxanne, Cheng, Jan-Fang, Goodwin, Lynne A., Pitluck, Sam, Liolios, Konstantinos, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Pan, Chongle, Brambilla, Evelyne-Marie, Rohde, Manfred, Tindall, Brian J., Sikorski, Johannes, Göker, Markus, Detter, John C., Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter, Woyke, Tanja
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3368408/
https://www.ncbi.nlm.nih.gov/pubmed/22675595
http://dx.doi.org/10.4056/sigs.2435521
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author Copeland, Alex
Gu, Wei
Yasawong, Montri
Lapidus, Alla
Lucas, Susan
Deshpande, Shweta
Pagani, Ioanna
Tapia, Roxanne
Cheng, Jan-Fang
Goodwin, Lynne A.
Pitluck, Sam
Liolios, Konstantinos
Ivanova, Natalia
Mavromatis, Konstantinos
Mikhailova, Natalia
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Pan, Chongle
Brambilla, Evelyne-Marie
Rohde, Manfred
Tindall, Brian J.
Sikorski, Johannes
Göker, Markus
Detter, John C.
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Woyke, Tanja
author_facet Copeland, Alex
Gu, Wei
Yasawong, Montri
Lapidus, Alla
Lucas, Susan
Deshpande, Shweta
Pagani, Ioanna
Tapia, Roxanne
Cheng, Jan-Fang
Goodwin, Lynne A.
Pitluck, Sam
Liolios, Konstantinos
Ivanova, Natalia
Mavromatis, Konstantinos
Mikhailova, Natalia
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Pan, Chongle
Brambilla, Evelyne-Marie
Rohde, Manfred
Tindall, Brian J.
Sikorski, Johannes
Göker, Markus
Detter, John C.
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Woyke, Tanja
author_sort Copeland, Alex
collection PubMed
description Marinithermus hydrothermalis Sako et al. 2003 is the type species of the monotypic genus Marinithermus. M. hydrothermalis T1(T) was the first isolate within the phylum “Thermus-Deinococcus” to exhibit optimal growth under a salinity equivalent to that of sea water and to have an absolute requirement for NaCl for growth. M. hydrothermalis T1(T) is of interest because it may provide a new insight into the ecological significance of the aerobic, thermophilic decomposers in the circulation of organic compounds in deep-sea hydrothermal vent ecosystems. This is the first completed genome sequence of a member of the genus Marinithermus and the seventh sequence from the family Thermaceae. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 2,269,167 bp long genome with its 2,251 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-33684082012-06-06 Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney Copeland, Alex Gu, Wei Yasawong, Montri Lapidus, Alla Lucas, Susan Deshpande, Shweta Pagani, Ioanna Tapia, Roxanne Cheng, Jan-Fang Goodwin, Lynne A. Pitluck, Sam Liolios, Konstantinos Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Pan, Chongle Brambilla, Evelyne-Marie Rohde, Manfred Tindall, Brian J. Sikorski, Johannes Göker, Markus Detter, John C. Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Woyke, Tanja Stand Genomic Sci Short Genome Reports Marinithermus hydrothermalis Sako et al. 2003 is the type species of the monotypic genus Marinithermus. M. hydrothermalis T1(T) was the first isolate within the phylum “Thermus-Deinococcus” to exhibit optimal growth under a salinity equivalent to that of sea water and to have an absolute requirement for NaCl for growth. M. hydrothermalis T1(T) is of interest because it may provide a new insight into the ecological significance of the aerobic, thermophilic decomposers in the circulation of organic compounds in deep-sea hydrothermal vent ecosystems. This is the first completed genome sequence of a member of the genus Marinithermus and the seventh sequence from the family Thermaceae. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 2,269,167 bp long genome with its 2,251 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2012-03-05 /pmc/articles/PMC3368408/ /pubmed/22675595 http://dx.doi.org/10.4056/sigs.2435521 Text en
spellingShingle Short Genome Reports
Copeland, Alex
Gu, Wei
Yasawong, Montri
Lapidus, Alla
Lucas, Susan
Deshpande, Shweta
Pagani, Ioanna
Tapia, Roxanne
Cheng, Jan-Fang
Goodwin, Lynne A.
Pitluck, Sam
Liolios, Konstantinos
Ivanova, Natalia
Mavromatis, Konstantinos
Mikhailova, Natalia
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Pan, Chongle
Brambilla, Evelyne-Marie
Rohde, Manfred
Tindall, Brian J.
Sikorski, Johannes
Göker, Markus
Detter, John C.
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Woyke, Tanja
Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney
title Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney
title_full Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney
title_fullStr Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney
title_full_unstemmed Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney
title_short Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney
title_sort complete genome sequence of the aerobic, heterotroph marinithermus hydrothermalis type strain (t1(t)) from a deep-sea hydrothermal vent chimney
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3368408/
https://www.ncbi.nlm.nih.gov/pubmed/22675595
http://dx.doi.org/10.4056/sigs.2435521
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