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Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T))

Herpetosiphon aurantiacus Holt and Lewin 1968 is the type species of the genus Herpetosiphon, which in turn is the type genus of the family Herpetosiphonaceae, type family of the order Herpetosiphonales in the phylum Chloroflexi. H. aurantiacus cells are organized in filaments which can rapidly glid...

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Autores principales: Kiss, Hajnalka, Nett, Markus, Domin, Nicole, Martin, Karin, Maresca, Julia A., Copeland, Alex, Lapidus, Alla, Lucas, Susan, Berry, Kerrie W., Glavina Del Rio, Tijana, Dalin, Eileen, Tice, Hope, Pitluck, Sam, Richardson, Paul, Bruce, David, Goodwin, Lynne, Han, Cliff, Detter, John C., Schmutz, Jeremy, Brettin, Thomas, Land, Miriam, Hauser, Loren, Kyrpides, Nikos C., Ivanova, Natalia, Göker, Markus, Woyke, Tanja, Klenk, Hans-Peter, Bryant, Donald A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3368417/
https://www.ncbi.nlm.nih.gov/pubmed/22675585
http://dx.doi.org/10.4056/sigs.2194987
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author Kiss, Hajnalka
Nett, Markus
Domin, Nicole
Martin, Karin
Maresca, Julia A.
Copeland, Alex
Lapidus, Alla
Lucas, Susan
Berry, Kerrie W.
Glavina Del Rio, Tijana
Dalin, Eileen
Tice, Hope
Pitluck, Sam
Richardson, Paul
Bruce, David
Goodwin, Lynne
Han, Cliff
Detter, John C.
Schmutz, Jeremy
Brettin, Thomas
Land, Miriam
Hauser, Loren
Kyrpides, Nikos C.
Ivanova, Natalia
Göker, Markus
Woyke, Tanja
Klenk, Hans-Peter
Bryant, Donald A.
author_facet Kiss, Hajnalka
Nett, Markus
Domin, Nicole
Martin, Karin
Maresca, Julia A.
Copeland, Alex
Lapidus, Alla
Lucas, Susan
Berry, Kerrie W.
Glavina Del Rio, Tijana
Dalin, Eileen
Tice, Hope
Pitluck, Sam
Richardson, Paul
Bruce, David
Goodwin, Lynne
Han, Cliff
Detter, John C.
Schmutz, Jeremy
Brettin, Thomas
Land, Miriam
Hauser, Loren
Kyrpides, Nikos C.
Ivanova, Natalia
Göker, Markus
Woyke, Tanja
Klenk, Hans-Peter
Bryant, Donald A.
author_sort Kiss, Hajnalka
collection PubMed
description Herpetosiphon aurantiacus Holt and Lewin 1968 is the type species of the genus Herpetosiphon, which in turn is the type genus of the family Herpetosiphonaceae, type family of the order Herpetosiphonales in the phylum Chloroflexi. H. aurantiacus cells are organized in filaments which can rapidly glide. The species is of interest not only because of its rather isolated position in the tree of life, but also because Herpetosiphon ssp. were identified as predators capable of facultative predation by a wolf pack strategy and of degrading the prey organisms by excreted hydrolytic enzymes. The genome of H. aurantiacus strain 114-95(T) is the first completely sequenced genome of a member of the family Herpetosiphonaceae. The 6,346,587 bp long chromosome and the two 339,639 bp and 99,204 bp long plasmids with a total of 5,577 protein-coding and 77 RNA genes was sequenced as part of the DOE Joint Genome Institute Program DOEM 2005.
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spelling pubmed-33684172012-06-06 Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T)) Kiss, Hajnalka Nett, Markus Domin, Nicole Martin, Karin Maresca, Julia A. Copeland, Alex Lapidus, Alla Lucas, Susan Berry, Kerrie W. Glavina Del Rio, Tijana Dalin, Eileen Tice, Hope Pitluck, Sam Richardson, Paul Bruce, David Goodwin, Lynne Han, Cliff Detter, John C. Schmutz, Jeremy Brettin, Thomas Land, Miriam Hauser, Loren Kyrpides, Nikos C. Ivanova, Natalia Göker, Markus Woyke, Tanja Klenk, Hans-Peter Bryant, Donald A. Stand Genomic Sci Short Genome Reports Herpetosiphon aurantiacus Holt and Lewin 1968 is the type species of the genus Herpetosiphon, which in turn is the type genus of the family Herpetosiphonaceae, type family of the order Herpetosiphonales in the phylum Chloroflexi. H. aurantiacus cells are organized in filaments which can rapidly glide. The species is of interest not only because of its rather isolated position in the tree of life, but also because Herpetosiphon ssp. were identified as predators capable of facultative predation by a wolf pack strategy and of degrading the prey organisms by excreted hydrolytic enzymes. The genome of H. aurantiacus strain 114-95(T) is the first completely sequenced genome of a member of the family Herpetosiphonaceae. The 6,346,587 bp long chromosome and the two 339,639 bp and 99,204 bp long plasmids with a total of 5,577 protein-coding and 77 RNA genes was sequenced as part of the DOE Joint Genome Institute Program DOEM 2005. Michigan State University 2011-12-23 /pmc/articles/PMC3368417/ /pubmed/22675585 http://dx.doi.org/10.4056/sigs.2194987 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Kiss, Hajnalka
Nett, Markus
Domin, Nicole
Martin, Karin
Maresca, Julia A.
Copeland, Alex
Lapidus, Alla
Lucas, Susan
Berry, Kerrie W.
Glavina Del Rio, Tijana
Dalin, Eileen
Tice, Hope
Pitluck, Sam
Richardson, Paul
Bruce, David
Goodwin, Lynne
Han, Cliff
Detter, John C.
Schmutz, Jeremy
Brettin, Thomas
Land, Miriam
Hauser, Loren
Kyrpides, Nikos C.
Ivanova, Natalia
Göker, Markus
Woyke, Tanja
Klenk, Hans-Peter
Bryant, Donald A.
Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T))
title Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T))
title_full Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T))
title_fullStr Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T))
title_full_unstemmed Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T))
title_short Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T))
title_sort complete genome sequence of the filamentous gliding predatory bacterium herpetosiphon aurantiacus type strain (114-95(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3368417/
https://www.ncbi.nlm.nih.gov/pubmed/22675585
http://dx.doi.org/10.4056/sigs.2194987
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