Cargando…
Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T))
Herpetosiphon aurantiacus Holt and Lewin 1968 is the type species of the genus Herpetosiphon, which in turn is the type genus of the family Herpetosiphonaceae, type family of the order Herpetosiphonales in the phylum Chloroflexi. H. aurantiacus cells are organized in filaments which can rapidly glid...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Michigan State University
2011
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3368417/ https://www.ncbi.nlm.nih.gov/pubmed/22675585 http://dx.doi.org/10.4056/sigs.2194987 |
_version_ | 1782234954606837760 |
---|---|
author | Kiss, Hajnalka Nett, Markus Domin, Nicole Martin, Karin Maresca, Julia A. Copeland, Alex Lapidus, Alla Lucas, Susan Berry, Kerrie W. Glavina Del Rio, Tijana Dalin, Eileen Tice, Hope Pitluck, Sam Richardson, Paul Bruce, David Goodwin, Lynne Han, Cliff Detter, John C. Schmutz, Jeremy Brettin, Thomas Land, Miriam Hauser, Loren Kyrpides, Nikos C. Ivanova, Natalia Göker, Markus Woyke, Tanja Klenk, Hans-Peter Bryant, Donald A. |
author_facet | Kiss, Hajnalka Nett, Markus Domin, Nicole Martin, Karin Maresca, Julia A. Copeland, Alex Lapidus, Alla Lucas, Susan Berry, Kerrie W. Glavina Del Rio, Tijana Dalin, Eileen Tice, Hope Pitluck, Sam Richardson, Paul Bruce, David Goodwin, Lynne Han, Cliff Detter, John C. Schmutz, Jeremy Brettin, Thomas Land, Miriam Hauser, Loren Kyrpides, Nikos C. Ivanova, Natalia Göker, Markus Woyke, Tanja Klenk, Hans-Peter Bryant, Donald A. |
author_sort | Kiss, Hajnalka |
collection | PubMed |
description | Herpetosiphon aurantiacus Holt and Lewin 1968 is the type species of the genus Herpetosiphon, which in turn is the type genus of the family Herpetosiphonaceae, type family of the order Herpetosiphonales in the phylum Chloroflexi. H. aurantiacus cells are organized in filaments which can rapidly glide. The species is of interest not only because of its rather isolated position in the tree of life, but also because Herpetosiphon ssp. were identified as predators capable of facultative predation by a wolf pack strategy and of degrading the prey organisms by excreted hydrolytic enzymes. The genome of H. aurantiacus strain 114-95(T) is the first completely sequenced genome of a member of the family Herpetosiphonaceae. The 6,346,587 bp long chromosome and the two 339,639 bp and 99,204 bp long plasmids with a total of 5,577 protein-coding and 77 RNA genes was sequenced as part of the DOE Joint Genome Institute Program DOEM 2005. |
format | Online Article Text |
id | pubmed-3368417 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-33684172012-06-06 Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T)) Kiss, Hajnalka Nett, Markus Domin, Nicole Martin, Karin Maresca, Julia A. Copeland, Alex Lapidus, Alla Lucas, Susan Berry, Kerrie W. Glavina Del Rio, Tijana Dalin, Eileen Tice, Hope Pitluck, Sam Richardson, Paul Bruce, David Goodwin, Lynne Han, Cliff Detter, John C. Schmutz, Jeremy Brettin, Thomas Land, Miriam Hauser, Loren Kyrpides, Nikos C. Ivanova, Natalia Göker, Markus Woyke, Tanja Klenk, Hans-Peter Bryant, Donald A. Stand Genomic Sci Short Genome Reports Herpetosiphon aurantiacus Holt and Lewin 1968 is the type species of the genus Herpetosiphon, which in turn is the type genus of the family Herpetosiphonaceae, type family of the order Herpetosiphonales in the phylum Chloroflexi. H. aurantiacus cells are organized in filaments which can rapidly glide. The species is of interest not only because of its rather isolated position in the tree of life, but also because Herpetosiphon ssp. were identified as predators capable of facultative predation by a wolf pack strategy and of degrading the prey organisms by excreted hydrolytic enzymes. The genome of H. aurantiacus strain 114-95(T) is the first completely sequenced genome of a member of the family Herpetosiphonaceae. The 6,346,587 bp long chromosome and the two 339,639 bp and 99,204 bp long plasmids with a total of 5,577 protein-coding and 77 RNA genes was sequenced as part of the DOE Joint Genome Institute Program DOEM 2005. Michigan State University 2011-12-23 /pmc/articles/PMC3368417/ /pubmed/22675585 http://dx.doi.org/10.4056/sigs.2194987 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Kiss, Hajnalka Nett, Markus Domin, Nicole Martin, Karin Maresca, Julia A. Copeland, Alex Lapidus, Alla Lucas, Susan Berry, Kerrie W. Glavina Del Rio, Tijana Dalin, Eileen Tice, Hope Pitluck, Sam Richardson, Paul Bruce, David Goodwin, Lynne Han, Cliff Detter, John C. Schmutz, Jeremy Brettin, Thomas Land, Miriam Hauser, Loren Kyrpides, Nikos C. Ivanova, Natalia Göker, Markus Woyke, Tanja Klenk, Hans-Peter Bryant, Donald A. Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T)) |
title | Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T)) |
title_full | Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T)) |
title_fullStr | Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T)) |
title_full_unstemmed | Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T)) |
title_short | Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T)) |
title_sort | complete genome sequence of the filamentous gliding predatory bacterium herpetosiphon aurantiacus type strain (114-95(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3368417/ https://www.ncbi.nlm.nih.gov/pubmed/22675585 http://dx.doi.org/10.4056/sigs.2194987 |
work_keys_str_mv | AT kisshajnalka completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT nettmarkus completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT dominnicole completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT martinkarin completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT marescajuliaa completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT copelandalex completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT lapidusalla completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT lucassusan completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT berrykerriew completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT glavinadelriotijana completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT dalineileen completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT ticehope completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT pitlucksam completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT richardsonpaul completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT brucedavid completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT goodwinlynne completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT hancliff completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT detterjohnc completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT schmutzjeremy completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT brettinthomas completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT landmiriam completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT hauserloren completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT kyrpidesnikosc completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT ivanovanatalia completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT gokermarkus completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT woyketanja completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT klenkhanspeter completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t AT bryantdonalda completegenomesequenceofthefilamentousglidingpredatorybacteriumherpetosiphonaurantiacustypestrain11495t |