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Microsatellites Cross-Species Amplification across Some African Cichlids
The transfer of the genomic resources developed in the Nile tilapia, Oreochromis niloticus, to other Tilapiines sensu lato and African cichlid would provide new possibilities to study this amazing group from genetics, ecology, evolution, aquaculture, and conservation point of view. We tested the cro...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3373121/ https://www.ncbi.nlm.nih.gov/pubmed/22701809 http://dx.doi.org/10.1155/2012/870935 |
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author | Bezault, Etienne Rognon, Xavier Gharbi, Karim Baroiller, Jean-Francois Chevassus, Bernard |
author_facet | Bezault, Etienne Rognon, Xavier Gharbi, Karim Baroiller, Jean-Francois Chevassus, Bernard |
author_sort | Bezault, Etienne |
collection | PubMed |
description | The transfer of the genomic resources developed in the Nile tilapia, Oreochromis niloticus, to other Tilapiines sensu lato and African cichlid would provide new possibilities to study this amazing group from genetics, ecology, evolution, aquaculture, and conservation point of view. We tested the cross-species amplification of 32 O. niloticus microsatellite markers in a panel of 15 species from 5 different African cichlid tribes: Oreochromines (Oreochromis, Sarotherodon), Boreotilapiines (Tilapia), Chromidotilapines, Hemichromines, and Haplochromines. Amplification was successfully observed for 29 markers (91%), with a frequency of polymorphic (P(95)) loci per species around 70%. The mean number of alleles per locus and species was 3.2 but varied from 3.7 within Oreochromis species to 1.6 within the nontilapia species. The high level of cross-species amplification and polymorphism of the microsatellite markers tested in this study provides powerful tools for a wide range of molecular genetic studies within tilapia species as well as for other African cichlids. |
format | Online Article Text |
id | pubmed-3373121 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-33731212012-06-14 Microsatellites Cross-Species Amplification across Some African Cichlids Bezault, Etienne Rognon, Xavier Gharbi, Karim Baroiller, Jean-Francois Chevassus, Bernard Int J Evol Biol Research Article The transfer of the genomic resources developed in the Nile tilapia, Oreochromis niloticus, to other Tilapiines sensu lato and African cichlid would provide new possibilities to study this amazing group from genetics, ecology, evolution, aquaculture, and conservation point of view. We tested the cross-species amplification of 32 O. niloticus microsatellite markers in a panel of 15 species from 5 different African cichlid tribes: Oreochromines (Oreochromis, Sarotherodon), Boreotilapiines (Tilapia), Chromidotilapines, Hemichromines, and Haplochromines. Amplification was successfully observed for 29 markers (91%), with a frequency of polymorphic (P(95)) loci per species around 70%. The mean number of alleles per locus and species was 3.2 but varied from 3.7 within Oreochromis species to 1.6 within the nontilapia species. The high level of cross-species amplification and polymorphism of the microsatellite markers tested in this study provides powerful tools for a wide range of molecular genetic studies within tilapia species as well as for other African cichlids. Hindawi Publishing Corporation 2012 2012-06-04 /pmc/articles/PMC3373121/ /pubmed/22701809 http://dx.doi.org/10.1155/2012/870935 Text en Copyright © 2012 Etienne Bezault et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Bezault, Etienne Rognon, Xavier Gharbi, Karim Baroiller, Jean-Francois Chevassus, Bernard Microsatellites Cross-Species Amplification across Some African Cichlids |
title | Microsatellites Cross-Species Amplification across Some African Cichlids |
title_full | Microsatellites Cross-Species Amplification across Some African Cichlids |
title_fullStr | Microsatellites Cross-Species Amplification across Some African Cichlids |
title_full_unstemmed | Microsatellites Cross-Species Amplification across Some African Cichlids |
title_short | Microsatellites Cross-Species Amplification across Some African Cichlids |
title_sort | microsatellites cross-species amplification across some african cichlids |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3373121/ https://www.ncbi.nlm.nih.gov/pubmed/22701809 http://dx.doi.org/10.1155/2012/870935 |
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