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Microsatellites Cross-Species Amplification across Some African Cichlids

The transfer of the genomic resources developed in the Nile tilapia, Oreochromis niloticus, to other Tilapiines sensu lato and African cichlid would provide new possibilities to study this amazing group from genetics, ecology, evolution, aquaculture, and conservation point of view. We tested the cro...

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Autores principales: Bezault, Etienne, Rognon, Xavier, Gharbi, Karim, Baroiller, Jean-Francois, Chevassus, Bernard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3373121/
https://www.ncbi.nlm.nih.gov/pubmed/22701809
http://dx.doi.org/10.1155/2012/870935
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author Bezault, Etienne
Rognon, Xavier
Gharbi, Karim
Baroiller, Jean-Francois
Chevassus, Bernard
author_facet Bezault, Etienne
Rognon, Xavier
Gharbi, Karim
Baroiller, Jean-Francois
Chevassus, Bernard
author_sort Bezault, Etienne
collection PubMed
description The transfer of the genomic resources developed in the Nile tilapia, Oreochromis niloticus, to other Tilapiines sensu lato and African cichlid would provide new possibilities to study this amazing group from genetics, ecology, evolution, aquaculture, and conservation point of view. We tested the cross-species amplification of 32 O. niloticus microsatellite markers in a panel of 15 species from 5 different African cichlid tribes: Oreochromines (Oreochromis, Sarotherodon), Boreotilapiines (Tilapia), Chromidotilapines, Hemichromines, and Haplochromines. Amplification was successfully observed for 29 markers (91%), with a frequency of polymorphic (P(95)) loci per species around 70%. The mean number of alleles per locus and species was 3.2 but varied from 3.7 within Oreochromis species to 1.6 within the nontilapia species. The high level of cross-species amplification and polymorphism of the microsatellite markers tested in this study provides powerful tools for a wide range of molecular genetic studies within tilapia species as well as for other African cichlids.
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spelling pubmed-33731212012-06-14 Microsatellites Cross-Species Amplification across Some African Cichlids Bezault, Etienne Rognon, Xavier Gharbi, Karim Baroiller, Jean-Francois Chevassus, Bernard Int J Evol Biol Research Article The transfer of the genomic resources developed in the Nile tilapia, Oreochromis niloticus, to other Tilapiines sensu lato and African cichlid would provide new possibilities to study this amazing group from genetics, ecology, evolution, aquaculture, and conservation point of view. We tested the cross-species amplification of 32 O. niloticus microsatellite markers in a panel of 15 species from 5 different African cichlid tribes: Oreochromines (Oreochromis, Sarotherodon), Boreotilapiines (Tilapia), Chromidotilapines, Hemichromines, and Haplochromines. Amplification was successfully observed for 29 markers (91%), with a frequency of polymorphic (P(95)) loci per species around 70%. The mean number of alleles per locus and species was 3.2 but varied from 3.7 within Oreochromis species to 1.6 within the nontilapia species. The high level of cross-species amplification and polymorphism of the microsatellite markers tested in this study provides powerful tools for a wide range of molecular genetic studies within tilapia species as well as for other African cichlids. Hindawi Publishing Corporation 2012 2012-06-04 /pmc/articles/PMC3373121/ /pubmed/22701809 http://dx.doi.org/10.1155/2012/870935 Text en Copyright © 2012 Etienne Bezault et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Bezault, Etienne
Rognon, Xavier
Gharbi, Karim
Baroiller, Jean-Francois
Chevassus, Bernard
Microsatellites Cross-Species Amplification across Some African Cichlids
title Microsatellites Cross-Species Amplification across Some African Cichlids
title_full Microsatellites Cross-Species Amplification across Some African Cichlids
title_fullStr Microsatellites Cross-Species Amplification across Some African Cichlids
title_full_unstemmed Microsatellites Cross-Species Amplification across Some African Cichlids
title_short Microsatellites Cross-Species Amplification across Some African Cichlids
title_sort microsatellites cross-species amplification across some african cichlids
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3373121/
https://www.ncbi.nlm.nih.gov/pubmed/22701809
http://dx.doi.org/10.1155/2012/870935
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