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Action Potential Waveform Variability Limits Multi-Unit Separation in Freely Behaving Rats
Extracellular multi-unit recording is a widely used technique to study spontaneous and evoked neuronal activity in awake behaving animals. These recordings are done using either single-wire or mulitwire electrodes such as tetrodes. In this study we have tested the ability of single-wire electrodes t...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3373584/ https://www.ncbi.nlm.nih.gov/pubmed/22719894 http://dx.doi.org/10.1371/journal.pone.0038482 |
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author | Stratton, Peter Cheung, Allen Wiles, Janet Kiyatkin, Eugene Sah, Pankaj Windels, François |
author_facet | Stratton, Peter Cheung, Allen Wiles, Janet Kiyatkin, Eugene Sah, Pankaj Windels, François |
author_sort | Stratton, Peter |
collection | PubMed |
description | Extracellular multi-unit recording is a widely used technique to study spontaneous and evoked neuronal activity in awake behaving animals. These recordings are done using either single-wire or mulitwire electrodes such as tetrodes. In this study we have tested the ability of single-wire electrodes to discriminate activity from multiple neurons under conditions of varying noise and neuronal cell density. Using extracellular single-unit recording, coupled with iontophoresis to drive cell activity across a wide dynamic range, we studied spike waveform variability, and explored systematic differences in single-unit spike waveform within and between brain regions as well as the influence of signal-to-noise ratio (SNR) on the similarity of spike waveforms. We also modelled spike misclassification for a range of cell densities based on neuronal recordings obtained at different SNRs. Modelling predictions were confirmed by classifying spike waveforms from multiple cells with various SNRs using a leading commercial spike-sorting system. Our results show that for single-wire recordings, multiple units can only be reliably distinguished under conditions of high recording SNR (≥4) and low neuronal density (≈20,000/ mm(3)). Physiological and behavioural changes, as well as technical limitations typical of awake animal preparations, reduce the accuracy of single-channel spike classification, resulting in serious classification errors. For SNR <4, the probability of misclassifying spikes approaches 100% in many cases. Our results suggest that in studies where the SNR is low or neuronal density is high, separation of distinct units needs to be evaluated with great caution. |
format | Online Article Text |
id | pubmed-3373584 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-33735842012-06-20 Action Potential Waveform Variability Limits Multi-Unit Separation in Freely Behaving Rats Stratton, Peter Cheung, Allen Wiles, Janet Kiyatkin, Eugene Sah, Pankaj Windels, François PLoS One Research Article Extracellular multi-unit recording is a widely used technique to study spontaneous and evoked neuronal activity in awake behaving animals. These recordings are done using either single-wire or mulitwire electrodes such as tetrodes. In this study we have tested the ability of single-wire electrodes to discriminate activity from multiple neurons under conditions of varying noise and neuronal cell density. Using extracellular single-unit recording, coupled with iontophoresis to drive cell activity across a wide dynamic range, we studied spike waveform variability, and explored systematic differences in single-unit spike waveform within and between brain regions as well as the influence of signal-to-noise ratio (SNR) on the similarity of spike waveforms. We also modelled spike misclassification for a range of cell densities based on neuronal recordings obtained at different SNRs. Modelling predictions were confirmed by classifying spike waveforms from multiple cells with various SNRs using a leading commercial spike-sorting system. Our results show that for single-wire recordings, multiple units can only be reliably distinguished under conditions of high recording SNR (≥4) and low neuronal density (≈20,000/ mm(3)). Physiological and behavioural changes, as well as technical limitations typical of awake animal preparations, reduce the accuracy of single-channel spike classification, resulting in serious classification errors. For SNR <4, the probability of misclassifying spikes approaches 100% in many cases. Our results suggest that in studies where the SNR is low or neuronal density is high, separation of distinct units needs to be evaluated with great caution. Public Library of Science 2012-06-12 /pmc/articles/PMC3373584/ /pubmed/22719894 http://dx.doi.org/10.1371/journal.pone.0038482 Text en This is an open-access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication. https://creativecommons.org/publicdomain/zero/1.0/ This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration, which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. |
spellingShingle | Research Article Stratton, Peter Cheung, Allen Wiles, Janet Kiyatkin, Eugene Sah, Pankaj Windels, François Action Potential Waveform Variability Limits Multi-Unit Separation in Freely Behaving Rats |
title | Action Potential Waveform Variability Limits Multi-Unit Separation in Freely Behaving Rats |
title_full | Action Potential Waveform Variability Limits Multi-Unit Separation in Freely Behaving Rats |
title_fullStr | Action Potential Waveform Variability Limits Multi-Unit Separation in Freely Behaving Rats |
title_full_unstemmed | Action Potential Waveform Variability Limits Multi-Unit Separation in Freely Behaving Rats |
title_short | Action Potential Waveform Variability Limits Multi-Unit Separation in Freely Behaving Rats |
title_sort | action potential waveform variability limits multi-unit separation in freely behaving rats |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3373584/ https://www.ncbi.nlm.nih.gov/pubmed/22719894 http://dx.doi.org/10.1371/journal.pone.0038482 |
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