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Younger Genes Are Less Likely to Be Essential than Older Genes, and Duplicates Are Less Likely to Be Essential than Singletons of the Same Age

Recently duplicated genes are believed to often overlap in function and expression. A priori, they are thus less likely to be essential. Although this was indeed observed in yeast, mouse singletons and duplicates were reported to be equally often essential. This contradiction can only partly be expl...

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Autores principales: Chen, Wei-Hua, Trachana, Kalliopi, Lercher, Martin J., Bork, Peer
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3375470/
https://www.ncbi.nlm.nih.gov/pubmed/22319151
http://dx.doi.org/10.1093/molbev/mss014
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author Chen, Wei-Hua
Trachana, Kalliopi
Lercher, Martin J.
Bork, Peer
author_facet Chen, Wei-Hua
Trachana, Kalliopi
Lercher, Martin J.
Bork, Peer
author_sort Chen, Wei-Hua
collection PubMed
description Recently duplicated genes are believed to often overlap in function and expression. A priori, they are thus less likely to be essential. Although this was indeed observed in yeast, mouse singletons and duplicates were reported to be equally often essential. This contradiction can only partly be explained by experimental biases. We herein show that older genes (i.e., genes with earlier phyletic origin) are more likely to be essential, regardless of their duplication status. At a given phyletic gene age, duplicates are always less likely to be essential compared with singletons. The “paradoxical” high essentiality among mouse gene duplicates is then caused by different age profiles of singletons and duplicates, with the latter tending to be derived from older genes.
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spelling pubmed-33754702012-06-15 Younger Genes Are Less Likely to Be Essential than Older Genes, and Duplicates Are Less Likely to Be Essential than Singletons of the Same Age Chen, Wei-Hua Trachana, Kalliopi Lercher, Martin J. Bork, Peer Mol Biol Evol Letters Recently duplicated genes are believed to often overlap in function and expression. A priori, they are thus less likely to be essential. Although this was indeed observed in yeast, mouse singletons and duplicates were reported to be equally often essential. This contradiction can only partly be explained by experimental biases. We herein show that older genes (i.e., genes with earlier phyletic origin) are more likely to be essential, regardless of their duplication status. At a given phyletic gene age, duplicates are always less likely to be essential compared with singletons. The “paradoxical” high essentiality among mouse gene duplicates is then caused by different age profiles of singletons and duplicates, with the latter tending to be derived from older genes. Oxford University Press 2012-07 2012-01-19 /pmc/articles/PMC3375470/ /pubmed/22319151 http://dx.doi.org/10.1093/molbev/mss014 Text en © The Author(s) 2012. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Letters
Chen, Wei-Hua
Trachana, Kalliopi
Lercher, Martin J.
Bork, Peer
Younger Genes Are Less Likely to Be Essential than Older Genes, and Duplicates Are Less Likely to Be Essential than Singletons of the Same Age
title Younger Genes Are Less Likely to Be Essential than Older Genes, and Duplicates Are Less Likely to Be Essential than Singletons of the Same Age
title_full Younger Genes Are Less Likely to Be Essential than Older Genes, and Duplicates Are Less Likely to Be Essential than Singletons of the Same Age
title_fullStr Younger Genes Are Less Likely to Be Essential than Older Genes, and Duplicates Are Less Likely to Be Essential than Singletons of the Same Age
title_full_unstemmed Younger Genes Are Less Likely to Be Essential than Older Genes, and Duplicates Are Less Likely to Be Essential than Singletons of the Same Age
title_short Younger Genes Are Less Likely to Be Essential than Older Genes, and Duplicates Are Less Likely to Be Essential than Singletons of the Same Age
title_sort younger genes are less likely to be essential than older genes, and duplicates are less likely to be essential than singletons of the same age
topic Letters
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3375470/
https://www.ncbi.nlm.nih.gov/pubmed/22319151
http://dx.doi.org/10.1093/molbev/mss014
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