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Peanut (Arachis hypogaea) Expressed Sequence Tag Project: Progress and Application

Many plant ESTs have been sequenced as an alternative to whole genome sequences, including peanut because of the genome size and complexity. The US peanut research community had the historic 2004 Atlanta Genomics Workshop and named the EST project as a main priority. As of August 2011, the peanut re...

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Autores principales: Feng, Suping, Wang, Xingjun, Zhang, Xinyou, Dang, Phat M., Holbrook, C. Corley, Culbreath, Albert K., Wu, Yaoting, Guo, Baozhu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3382957/
https://www.ncbi.nlm.nih.gov/pubmed/22745594
http://dx.doi.org/10.1155/2012/373768
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author Feng, Suping
Wang, Xingjun
Zhang, Xinyou
Dang, Phat M.
Holbrook, C. Corley
Culbreath, Albert K.
Wu, Yaoting
Guo, Baozhu
author_facet Feng, Suping
Wang, Xingjun
Zhang, Xinyou
Dang, Phat M.
Holbrook, C. Corley
Culbreath, Albert K.
Wu, Yaoting
Guo, Baozhu
author_sort Feng, Suping
collection PubMed
description Many plant ESTs have been sequenced as an alternative to whole genome sequences, including peanut because of the genome size and complexity. The US peanut research community had the historic 2004 Atlanta Genomics Workshop and named the EST project as a main priority. As of August 2011, the peanut research community had deposited 252,832 ESTs in the public NCBI EST database, and this resource has been providing the community valuable tools and core foundations for various genome-scale experiments before the whole genome sequencing project. These EST resources have been used for marker development, gene cloning, microarray gene expression and genetic map construction. Certainly, the peanut EST sequence resources have been shown to have a wide range of applications and accomplished its essential role at the time of need. Then the EST project contributes to the second historic event, the Peanut Genome Project 2010 Inaugural Meeting also held in Atlanta where it was decided to sequence the entire peanut genome. After the completion of peanut whole genome sequencing, ESTs or transcriptome will continue to play an important role to fill in knowledge gaps, to identify particular genes and to explore gene function.
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spelling pubmed-33829572012-06-28 Peanut (Arachis hypogaea) Expressed Sequence Tag Project: Progress and Application Feng, Suping Wang, Xingjun Zhang, Xinyou Dang, Phat M. Holbrook, C. Corley Culbreath, Albert K. Wu, Yaoting Guo, Baozhu Comp Funct Genomics Review Article Many plant ESTs have been sequenced as an alternative to whole genome sequences, including peanut because of the genome size and complexity. The US peanut research community had the historic 2004 Atlanta Genomics Workshop and named the EST project as a main priority. As of August 2011, the peanut research community had deposited 252,832 ESTs in the public NCBI EST database, and this resource has been providing the community valuable tools and core foundations for various genome-scale experiments before the whole genome sequencing project. These EST resources have been used for marker development, gene cloning, microarray gene expression and genetic map construction. Certainly, the peanut EST sequence resources have been shown to have a wide range of applications and accomplished its essential role at the time of need. Then the EST project contributes to the second historic event, the Peanut Genome Project 2010 Inaugural Meeting also held in Atlanta where it was decided to sequence the entire peanut genome. After the completion of peanut whole genome sequencing, ESTs or transcriptome will continue to play an important role to fill in knowledge gaps, to identify particular genes and to explore gene function. Hindawi Publishing Corporation 2012 2012-06-17 /pmc/articles/PMC3382957/ /pubmed/22745594 http://dx.doi.org/10.1155/2012/373768 Text en Copyright © 2012 Suping Feng et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review Article
Feng, Suping
Wang, Xingjun
Zhang, Xinyou
Dang, Phat M.
Holbrook, C. Corley
Culbreath, Albert K.
Wu, Yaoting
Guo, Baozhu
Peanut (Arachis hypogaea) Expressed Sequence Tag Project: Progress and Application
title Peanut (Arachis hypogaea) Expressed Sequence Tag Project: Progress and Application
title_full Peanut (Arachis hypogaea) Expressed Sequence Tag Project: Progress and Application
title_fullStr Peanut (Arachis hypogaea) Expressed Sequence Tag Project: Progress and Application
title_full_unstemmed Peanut (Arachis hypogaea) Expressed Sequence Tag Project: Progress and Application
title_short Peanut (Arachis hypogaea) Expressed Sequence Tag Project: Progress and Application
title_sort peanut (arachis hypogaea) expressed sequence tag project: progress and application
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3382957/
https://www.ncbi.nlm.nih.gov/pubmed/22745594
http://dx.doi.org/10.1155/2012/373768
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