Cargando…
Single-Nucleotide Polymorphisms Associated with Skin Naphthyl–Keratin Adduct Levels in Workers Exposed to Naphthalene
Background: Individual genetic variation that results in differences in systemic response to xenobiotic exposure is not accounted for as a predictor of outcome in current exposure assessment models. Objective: We developed a strategy to investigate individual differences in single-nucleotide polymor...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Institute of Environmental Health Sciences
2012
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3385430/ https://www.ncbi.nlm.nih.gov/pubmed/22391508 http://dx.doi.org/10.1289/ehp.1104304 |
_version_ | 1782236869123112960 |
---|---|
author | Jiang, Rong French, John E. Stober, Vandy P. Kang-Sickel, Juei-Chuan C. Zou, Fei Nylander-French, Leena A. |
author_facet | Jiang, Rong French, John E. Stober, Vandy P. Kang-Sickel, Juei-Chuan C. Zou, Fei Nylander-French, Leena A. |
author_sort | Jiang, Rong |
collection | PubMed |
description | Background: Individual genetic variation that results in differences in systemic response to xenobiotic exposure is not accounted for as a predictor of outcome in current exposure assessment models. Objective: We developed a strategy to investigate individual differences in single-nucleotide polymorphisms (SNPs) as genetic markers associated with naphthyl–keratin adduct (NKA) levels measured in the skin of workers exposed to naphthalene. Methods: The SNP-association analysis was conducted in PLINK using candidate-gene analysis and genome-wide analysis. We identified significant SNP–NKA associations and investigated the potential impact of these SNPs along with personal and workplace factors on NKA levels using a multiple linear regression model and the Pratt index. Results: In candidate-gene analysis, a SNP (rs4852279) located near the CYP26B1 gene contributed to the 2-naphthyl–keratin adduct (2NKA) level. In the multiple linear regression model, the SNP rs4852279, dermal exposure, exposure time, task replacing foam, age, and ethnicity all were significant predictors of 2NKA level. In genome-wide analysis, no single SNP reached genome-wide significance for NKA levels (all p ≥ 1.05 × 10(–5)). Pathway and network analyses of SNPs associated with NKA levels were predicted to be involved in the regulation of cellular processes and homeostasis. Conclusions: These results provide evidence that a quantitative biomarker can be used as an intermediate phenotype when investigating the association between genetic markers and exposure–dose relationship in a small, well-characterized exposed worker population. |
format | Online Article Text |
id | pubmed-3385430 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | National Institute of Environmental Health Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-33854302012-06-28 Single-Nucleotide Polymorphisms Associated with Skin Naphthyl–Keratin Adduct Levels in Workers Exposed to Naphthalene Jiang, Rong French, John E. Stober, Vandy P. Kang-Sickel, Juei-Chuan C. Zou, Fei Nylander-French, Leena A. Environ Health Perspect Research Background: Individual genetic variation that results in differences in systemic response to xenobiotic exposure is not accounted for as a predictor of outcome in current exposure assessment models. Objective: We developed a strategy to investigate individual differences in single-nucleotide polymorphisms (SNPs) as genetic markers associated with naphthyl–keratin adduct (NKA) levels measured in the skin of workers exposed to naphthalene. Methods: The SNP-association analysis was conducted in PLINK using candidate-gene analysis and genome-wide analysis. We identified significant SNP–NKA associations and investigated the potential impact of these SNPs along with personal and workplace factors on NKA levels using a multiple linear regression model and the Pratt index. Results: In candidate-gene analysis, a SNP (rs4852279) located near the CYP26B1 gene contributed to the 2-naphthyl–keratin adduct (2NKA) level. In the multiple linear regression model, the SNP rs4852279, dermal exposure, exposure time, task replacing foam, age, and ethnicity all were significant predictors of 2NKA level. In genome-wide analysis, no single SNP reached genome-wide significance for NKA levels (all p ≥ 1.05 × 10(–5)). Pathway and network analyses of SNPs associated with NKA levels were predicted to be involved in the regulation of cellular processes and homeostasis. Conclusions: These results provide evidence that a quantitative biomarker can be used as an intermediate phenotype when investigating the association between genetic markers and exposure–dose relationship in a small, well-characterized exposed worker population. National Institute of Environmental Health Sciences 2012-03-05 2012-06 /pmc/articles/PMC3385430/ /pubmed/22391508 http://dx.doi.org/10.1289/ehp.1104304 Text en http://creativecommons.org/publicdomain/mark/1.0/ Publication of EHP lies in the public domain and is therefore without copyright. All text from EHP may be reprinted freely. Use of materials published in EHP should be acknowledged (for example, ?Reproduced with permission from Environmental Health Perspectives?); pertinent reference information should be provided for the article from which the material was reproduced. Articles from EHP, especially the News section, may contain photographs or illustrations copyrighted by other commercial organizations or individuals that may not be used without obtaining prior approval from the holder of the copyright. |
spellingShingle | Research Jiang, Rong French, John E. Stober, Vandy P. Kang-Sickel, Juei-Chuan C. Zou, Fei Nylander-French, Leena A. Single-Nucleotide Polymorphisms Associated with Skin Naphthyl–Keratin Adduct Levels in Workers Exposed to Naphthalene |
title | Single-Nucleotide Polymorphisms Associated with Skin Naphthyl–Keratin Adduct Levels in Workers Exposed to Naphthalene |
title_full | Single-Nucleotide Polymorphisms Associated with Skin Naphthyl–Keratin Adduct Levels in Workers Exposed to Naphthalene |
title_fullStr | Single-Nucleotide Polymorphisms Associated with Skin Naphthyl–Keratin Adduct Levels in Workers Exposed to Naphthalene |
title_full_unstemmed | Single-Nucleotide Polymorphisms Associated with Skin Naphthyl–Keratin Adduct Levels in Workers Exposed to Naphthalene |
title_short | Single-Nucleotide Polymorphisms Associated with Skin Naphthyl–Keratin Adduct Levels in Workers Exposed to Naphthalene |
title_sort | single-nucleotide polymorphisms associated with skin naphthyl–keratin adduct levels in workers exposed to naphthalene |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3385430/ https://www.ncbi.nlm.nih.gov/pubmed/22391508 http://dx.doi.org/10.1289/ehp.1104304 |
work_keys_str_mv | AT jiangrong singlenucleotidepolymorphismsassociatedwithskinnaphthylkeratinadductlevelsinworkersexposedtonaphthalene AT frenchjohne singlenucleotidepolymorphismsassociatedwithskinnaphthylkeratinadductlevelsinworkersexposedtonaphthalene AT stobervandyp singlenucleotidepolymorphismsassociatedwithskinnaphthylkeratinadductlevelsinworkersexposedtonaphthalene AT kangsickeljueichuanc singlenucleotidepolymorphismsassociatedwithskinnaphthylkeratinadductlevelsinworkersexposedtonaphthalene AT zoufei singlenucleotidepolymorphismsassociatedwithskinnaphthylkeratinadductlevelsinworkersexposedtonaphthalene AT nylanderfrenchleenaa singlenucleotidepolymorphismsassociatedwithskinnaphthylkeratinadductlevelsinworkersexposedtonaphthalene |