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Utility of Filter Paper for Preserving Insects, Bacteria, and Host Reservoir DNA for Molecular Testing

BACKGROUND: Appropriate methodology for storage biological materials, extraction of DNA, and proper DNA preservation is vital for studies involving genetic analysis of insects, bacteria, and reservoir hosts as well as for molecular diagnostics of pathogens carried by vectors and reservoirs. Here we...

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Autores principales: Karimian, F, Sedaghat, MM, Oshaghi, MA, Mohtarami, F, Dehkordi, A Sanei, Koosha, M, Akbari, S, Hashemi-Aghdam, SS
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Tehran University of Medical Sciences 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3385577/
https://www.ncbi.nlm.nih.gov/pubmed/22808417
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author Karimian, F
Sedaghat, MM
Oshaghi, MA
Mohtarami, F
Dehkordi, A Sanei
Koosha, M
Akbari, S
Hashemi-Aghdam, SS
author_facet Karimian, F
Sedaghat, MM
Oshaghi, MA
Mohtarami, F
Dehkordi, A Sanei
Koosha, M
Akbari, S
Hashemi-Aghdam, SS
author_sort Karimian, F
collection PubMed
description BACKGROUND: Appropriate methodology for storage biological materials, extraction of DNA, and proper DNA preservation is vital for studies involving genetic analysis of insects, bacteria, and reservoir hosts as well as for molecular diagnostics of pathogens carried by vectors and reservoirs. Here we tried to evaluate the utility of a simple filter paper-based for storage of insects, bacteria, rodent, and human DNAs using PCR assays. METHODS: Total body or haemolymph of individual mosquitoes, sand flies or cockroaches squashed or placed on the paper respectively. Extracted DNA of five different bacteria species as well as blood specimens of human and great gerbil Rhombomys opimus was pipetted directly onto filter paper. The papers were stored in room temperature up to 12 months during 2009 until 2011. At monthly intervals, PCR was conducted using a 1-mm disk from the DNA impregnated filter paper as target DNA. PCR amplification was performed against different target genes of the organisms including the ITS2-rDNA of mosquitoes, mtDNA-COI of the sand flies and cockroaches, 16SrRNA gene of the bacteria, and the mtDNA-CytB of the vertebrates. RESULTS: Successful PCR amplification was observed for all of the specimens regardless of the loci, taxon, or time of storage. The PCR amplification were ranged from 462 to 1500 bp and worked well for the specified target gene/s. Time of storage did not affect the amplification up to one year. CONCLUSION: The filter paper method is a simple and economical way to store, to preserve, and to distribute DNA samples for PCR analysis.
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spelling pubmed-33855772012-07-17 Utility of Filter Paper for Preserving Insects, Bacteria, and Host Reservoir DNA for Molecular Testing Karimian, F Sedaghat, MM Oshaghi, MA Mohtarami, F Dehkordi, A Sanei Koosha, M Akbari, S Hashemi-Aghdam, SS Iran J Arthropod Borne Dis Original Article BACKGROUND: Appropriate methodology for storage biological materials, extraction of DNA, and proper DNA preservation is vital for studies involving genetic analysis of insects, bacteria, and reservoir hosts as well as for molecular diagnostics of pathogens carried by vectors and reservoirs. Here we tried to evaluate the utility of a simple filter paper-based for storage of insects, bacteria, rodent, and human DNAs using PCR assays. METHODS: Total body or haemolymph of individual mosquitoes, sand flies or cockroaches squashed or placed on the paper respectively. Extracted DNA of five different bacteria species as well as blood specimens of human and great gerbil Rhombomys opimus was pipetted directly onto filter paper. The papers were stored in room temperature up to 12 months during 2009 until 2011. At monthly intervals, PCR was conducted using a 1-mm disk from the DNA impregnated filter paper as target DNA. PCR amplification was performed against different target genes of the organisms including the ITS2-rDNA of mosquitoes, mtDNA-COI of the sand flies and cockroaches, 16SrRNA gene of the bacteria, and the mtDNA-CytB of the vertebrates. RESULTS: Successful PCR amplification was observed for all of the specimens regardless of the loci, taxon, or time of storage. The PCR amplification were ranged from 462 to 1500 bp and worked well for the specified target gene/s. Time of storage did not affect the amplification up to one year. CONCLUSION: The filter paper method is a simple and economical way to store, to preserve, and to distribute DNA samples for PCR analysis. Tehran University of Medical Sciences 2011-12-31 /pmc/articles/PMC3385577/ /pubmed/22808417 Text en Copyright © Iranian Society of Medical Entomology & Tehran University of Medical Sciences http://creativecommons.org/licenses/by-nc/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution NonCommercial 3.0 License (CC BY-NC 3.0), which allows users to read, copy, distribute and make derivative works for non-commercial purposes from the material, as long as the author of the original work is cited properly.
spellingShingle Original Article
Karimian, F
Sedaghat, MM
Oshaghi, MA
Mohtarami, F
Dehkordi, A Sanei
Koosha, M
Akbari, S
Hashemi-Aghdam, SS
Utility of Filter Paper for Preserving Insects, Bacteria, and Host Reservoir DNA for Molecular Testing
title Utility of Filter Paper for Preserving Insects, Bacteria, and Host Reservoir DNA for Molecular Testing
title_full Utility of Filter Paper for Preserving Insects, Bacteria, and Host Reservoir DNA for Molecular Testing
title_fullStr Utility of Filter Paper for Preserving Insects, Bacteria, and Host Reservoir DNA for Molecular Testing
title_full_unstemmed Utility of Filter Paper for Preserving Insects, Bacteria, and Host Reservoir DNA for Molecular Testing
title_short Utility of Filter Paper for Preserving Insects, Bacteria, and Host Reservoir DNA for Molecular Testing
title_sort utility of filter paper for preserving insects, bacteria, and host reservoir dna for molecular testing
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3385577/
https://www.ncbi.nlm.nih.gov/pubmed/22808417
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