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A Novel “Reactomics” Approach for Cancer Diagnostics

Non-invasive detection and monitoring of lethal diseases, such as cancer, are considered as effective factors in treatment and survival. We describe a new disease diagnostic approach, denoted “reactomics”, based upon reactions between blood sera and an array of vesicles comprising different lipids a...

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Detalles Bibliográficos
Autores principales: Kolusheva, Sofiya, Yossef, Rami, Kugel, Aleksandra, Hanin-Avraham, Nirit, Cohen, Meital, Rubin, Eitan, Porgador, Angel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3386700/
https://www.ncbi.nlm.nih.gov/pubmed/22778601
http://dx.doi.org/10.3390/s120505572
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author Kolusheva, Sofiya
Yossef, Rami
Kugel, Aleksandra
Hanin-Avraham, Nirit
Cohen, Meital
Rubin, Eitan
Porgador, Angel
author_facet Kolusheva, Sofiya
Yossef, Rami
Kugel, Aleksandra
Hanin-Avraham, Nirit
Cohen, Meital
Rubin, Eitan
Porgador, Angel
author_sort Kolusheva, Sofiya
collection PubMed
description Non-invasive detection and monitoring of lethal diseases, such as cancer, are considered as effective factors in treatment and survival. We describe a new disease diagnostic approach, denoted “reactomics”, based upon reactions between blood sera and an array of vesicles comprising different lipids and polydiacetylene (PDA), a chromatic polymer. We show that reactions between sera and such a lipid/PDA vesicle array produce chromatic patterns which depend both upon the sera composition as well as the specific lipid constituents within the vesicles. The chromatic patterns were processed through machine-learning algorithms, and the bioinformatics analysis could distinguish both between cancer-bearing and healthy patients, respectively, as well between two types of cancers. Size-separation and enzymatic digestion experiments indicate that lipoproteins are the primary components in sera which react with the chromatic biomimetic vesicles. This colorimetric reactomics concept is highly generic, robust, and does not require a priori knowledge upon specific disease markers in sera. Therefore, it could be employed as complementary or alternative approach for disease diagnostics.
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spelling pubmed-33867002012-07-09 A Novel “Reactomics” Approach for Cancer Diagnostics Kolusheva, Sofiya Yossef, Rami Kugel, Aleksandra Hanin-Avraham, Nirit Cohen, Meital Rubin, Eitan Porgador, Angel Sensors (Basel) Article Non-invasive detection and monitoring of lethal diseases, such as cancer, are considered as effective factors in treatment and survival. We describe a new disease diagnostic approach, denoted “reactomics”, based upon reactions between blood sera and an array of vesicles comprising different lipids and polydiacetylene (PDA), a chromatic polymer. We show that reactions between sera and such a lipid/PDA vesicle array produce chromatic patterns which depend both upon the sera composition as well as the specific lipid constituents within the vesicles. The chromatic patterns were processed through machine-learning algorithms, and the bioinformatics analysis could distinguish both between cancer-bearing and healthy patients, respectively, as well between two types of cancers. Size-separation and enzymatic digestion experiments indicate that lipoproteins are the primary components in sera which react with the chromatic biomimetic vesicles. This colorimetric reactomics concept is highly generic, robust, and does not require a priori knowledge upon specific disease markers in sera. Therefore, it could be employed as complementary or alternative approach for disease diagnostics. Molecular Diversity Preservation International (MDPI) 2012-05-02 /pmc/articles/PMC3386700/ /pubmed/22778601 http://dx.doi.org/10.3390/s120505572 Text en © 2012 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Kolusheva, Sofiya
Yossef, Rami
Kugel, Aleksandra
Hanin-Avraham, Nirit
Cohen, Meital
Rubin, Eitan
Porgador, Angel
A Novel “Reactomics” Approach for Cancer Diagnostics
title A Novel “Reactomics” Approach for Cancer Diagnostics
title_full A Novel “Reactomics” Approach for Cancer Diagnostics
title_fullStr A Novel “Reactomics” Approach for Cancer Diagnostics
title_full_unstemmed A Novel “Reactomics” Approach for Cancer Diagnostics
title_short A Novel “Reactomics” Approach for Cancer Diagnostics
title_sort novel “reactomics” approach for cancer diagnostics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3386700/
https://www.ncbi.nlm.nih.gov/pubmed/22778601
http://dx.doi.org/10.3390/s120505572
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