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Performance of an Adipokine Pathway-Based Multilocus Genetic Risk Score for Prostate Cancer Risk Prediction

Few biomarkers are available to predict prostate cancer risk. Single nucleotide polymorphisms (SNPs) tend to have weak individual effects but, in combination, they have stronger predictive value. Adipokine pathways have been implicated in the pathogenesis. We used a candidate pathway approach to inv...

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Autores principales: Ribeiro, Ricardo J. T., Monteiro, Cátia P. D., Azevedo, Andreia S. M., Cunha, Virgínia F. M., Ramanakumar, Agnihotram V., Fraga, Avelino M., Pina, Francisco M., Lopes, Carlos M. S., Medeiros, Rui M., Franco, Eduardo L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3387135/
https://www.ncbi.nlm.nih.gov/pubmed/22792137
http://dx.doi.org/10.1371/journal.pone.0039236
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author Ribeiro, Ricardo J. T.
Monteiro, Cátia P. D.
Azevedo, Andreia S. M.
Cunha, Virgínia F. M.
Ramanakumar, Agnihotram V.
Fraga, Avelino M.
Pina, Francisco M.
Lopes, Carlos M. S.
Medeiros, Rui M.
Franco, Eduardo L.
author_facet Ribeiro, Ricardo J. T.
Monteiro, Cátia P. D.
Azevedo, Andreia S. M.
Cunha, Virgínia F. M.
Ramanakumar, Agnihotram V.
Fraga, Avelino M.
Pina, Francisco M.
Lopes, Carlos M. S.
Medeiros, Rui M.
Franco, Eduardo L.
author_sort Ribeiro, Ricardo J. T.
collection PubMed
description Few biomarkers are available to predict prostate cancer risk. Single nucleotide polymorphisms (SNPs) tend to have weak individual effects but, in combination, they have stronger predictive value. Adipokine pathways have been implicated in the pathogenesis. We used a candidate pathway approach to investigate 29 functional SNPs in key genes from relevant adipokine pathways in a sample of 1006 men eligible for prostate biopsy. We used stepwise multivariate logistic regression and bootstrapping to develop a multilocus genetic risk score by weighting each risk SNP empirically based on its association with disease. Seven common functional polymorphisms were associated with overall and high-grade prostate cancer (Gleason≥7), whereas three variants were associated with high metastatic-risk prostate cancer (PSA≥20 ng/mL and/or Gleason≥8). The addition of genetic variants to age and PSA improved the predictive accuracy for overall and high-grade prostate cancer, using either the area under the receiver-operating characteristics curves (P<0.02), the net reclassification improvement (P<0.001) and integrated discrimination improvement (P<0.001) measures. These results suggest that functional polymorphisms in adipokine pathways may act individually and cumulatively to affect risk and severity of prostate cancer, supporting the influence of adipokine pathways in the pathogenesis of prostate cancer. Use of such adipokine multilocus genetic risk score can enhance the predictive value of PSA and age in estimating absolute risk, which supports further evaluation of its clinical significance.
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spelling pubmed-33871352012-07-12 Performance of an Adipokine Pathway-Based Multilocus Genetic Risk Score for Prostate Cancer Risk Prediction Ribeiro, Ricardo J. T. Monteiro, Cátia P. D. Azevedo, Andreia S. M. Cunha, Virgínia F. M. Ramanakumar, Agnihotram V. Fraga, Avelino M. Pina, Francisco M. Lopes, Carlos M. S. Medeiros, Rui M. Franco, Eduardo L. PLoS One Research Article Few biomarkers are available to predict prostate cancer risk. Single nucleotide polymorphisms (SNPs) tend to have weak individual effects but, in combination, they have stronger predictive value. Adipokine pathways have been implicated in the pathogenesis. We used a candidate pathway approach to investigate 29 functional SNPs in key genes from relevant adipokine pathways in a sample of 1006 men eligible for prostate biopsy. We used stepwise multivariate logistic regression and bootstrapping to develop a multilocus genetic risk score by weighting each risk SNP empirically based on its association with disease. Seven common functional polymorphisms were associated with overall and high-grade prostate cancer (Gleason≥7), whereas three variants were associated with high metastatic-risk prostate cancer (PSA≥20 ng/mL and/or Gleason≥8). The addition of genetic variants to age and PSA improved the predictive accuracy for overall and high-grade prostate cancer, using either the area under the receiver-operating characteristics curves (P<0.02), the net reclassification improvement (P<0.001) and integrated discrimination improvement (P<0.001) measures. These results suggest that functional polymorphisms in adipokine pathways may act individually and cumulatively to affect risk and severity of prostate cancer, supporting the influence of adipokine pathways in the pathogenesis of prostate cancer. Use of such adipokine multilocus genetic risk score can enhance the predictive value of PSA and age in estimating absolute risk, which supports further evaluation of its clinical significance. Public Library of Science 2012-06-29 /pmc/articles/PMC3387135/ /pubmed/22792137 http://dx.doi.org/10.1371/journal.pone.0039236 Text en Ribeiro et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Ribeiro, Ricardo J. T.
Monteiro, Cátia P. D.
Azevedo, Andreia S. M.
Cunha, Virgínia F. M.
Ramanakumar, Agnihotram V.
Fraga, Avelino M.
Pina, Francisco M.
Lopes, Carlos M. S.
Medeiros, Rui M.
Franco, Eduardo L.
Performance of an Adipokine Pathway-Based Multilocus Genetic Risk Score for Prostate Cancer Risk Prediction
title Performance of an Adipokine Pathway-Based Multilocus Genetic Risk Score for Prostate Cancer Risk Prediction
title_full Performance of an Adipokine Pathway-Based Multilocus Genetic Risk Score for Prostate Cancer Risk Prediction
title_fullStr Performance of an Adipokine Pathway-Based Multilocus Genetic Risk Score for Prostate Cancer Risk Prediction
title_full_unstemmed Performance of an Adipokine Pathway-Based Multilocus Genetic Risk Score for Prostate Cancer Risk Prediction
title_short Performance of an Adipokine Pathway-Based Multilocus Genetic Risk Score for Prostate Cancer Risk Prediction
title_sort performance of an adipokine pathway-based multilocus genetic risk score for prostate cancer risk prediction
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3387135/
https://www.ncbi.nlm.nih.gov/pubmed/22792137
http://dx.doi.org/10.1371/journal.pone.0039236
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