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Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T))
Runella slithyformis Larkin and Williams 1978 is the type species of the genus Runella, which belongs to the Cytophagaceae, a family that was only recently classified to the order Cytophagales in the class Cytophagia. The species is of interest because it is able to grow at temperatures as low as 4°...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Michigan State University
2012
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3387789/ https://www.ncbi.nlm.nih.gov/pubmed/22768358 http://dx.doi.org/10.4056/sigs.2475579 |
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| author | Copeland, Alex Zhang, Xiaojing Misra, Monica Lapidus, Alla Nolan, Matt Lucas, Susan Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Goodwin, Lynne A. Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Pan, Chongle Jeffries, Cynthia D. Detter, John C. Brambilla, Evelyne-Marie Rohde, Manfred Djao, Olivier D. Ngatchou Göker, Markus Sikorski, Johannes Tindall, Brian J. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Mavromatis, Konstantinos |
| author_facet | Copeland, Alex Zhang, Xiaojing Misra, Monica Lapidus, Alla Nolan, Matt Lucas, Susan Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Goodwin, Lynne A. Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Pan, Chongle Jeffries, Cynthia D. Detter, John C. Brambilla, Evelyne-Marie Rohde, Manfred Djao, Olivier D. Ngatchou Göker, Markus Sikorski, Johannes Tindall, Brian J. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Mavromatis, Konstantinos |
| author_sort | Copeland, Alex |
| collection | PubMed |
| description | Runella slithyformis Larkin and Williams 1978 is the type species of the genus Runella, which belongs to the Cytophagaceae, a family that was only recently classified to the order Cytophagales in the class Cytophagia. The species is of interest because it is able to grow at temperatures as low as 4°C. This is the first completed genome sequence of a member of the genus Runella and the sixth sequence from the family Cytophagaceae. The 6,919,729 bp long genome consists of a 6.6 Mbp circular genome and five circular plasmids of 38.8 to 107.0 kbp length, harboring a total of 5,974 protein-coding and 51 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project. |
| format | Online Article Text |
| id | pubmed-3387789 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2012 |
| publisher | Michigan State University |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-33877892012-07-05 Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T)) Copeland, Alex Zhang, Xiaojing Misra, Monica Lapidus, Alla Nolan, Matt Lucas, Susan Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Goodwin, Lynne A. Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Pan, Chongle Jeffries, Cynthia D. Detter, John C. Brambilla, Evelyne-Marie Rohde, Manfred Djao, Olivier D. Ngatchou Göker, Markus Sikorski, Johannes Tindall, Brian J. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Mavromatis, Konstantinos Stand Genomic Sci Short Genome Reports Runella slithyformis Larkin and Williams 1978 is the type species of the genus Runella, which belongs to the Cytophagaceae, a family that was only recently classified to the order Cytophagales in the class Cytophagia. The species is of interest because it is able to grow at temperatures as low as 4°C. This is the first completed genome sequence of a member of the genus Runella and the sixth sequence from the family Cytophagaceae. The 6,919,729 bp long genome consists of a 6.6 Mbp circular genome and five circular plasmids of 38.8 to 107.0 kbp length, harboring a total of 5,974 protein-coding and 51 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2012-05-04 /pmc/articles/PMC3387789/ /pubmed/22768358 http://dx.doi.org/10.4056/sigs.2475579 Text en |
| spellingShingle | Short Genome Reports Copeland, Alex Zhang, Xiaojing Misra, Monica Lapidus, Alla Nolan, Matt Lucas, Susan Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Goodwin, Lynne A. Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Pan, Chongle Jeffries, Cynthia D. Detter, John C. Brambilla, Evelyne-Marie Rohde, Manfred Djao, Olivier D. Ngatchou Göker, Markus Sikorski, Johannes Tindall, Brian J. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Mavromatis, Konstantinos Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T)) |
| title | Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T)) |
| title_full | Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T)) |
| title_fullStr | Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T)) |
| title_full_unstemmed | Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T)) |
| title_short | Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T)) |
| title_sort | complete genome sequence of the aquatic bacterium runella slithyformis type strain (lsu 4(t)) |
| topic | Short Genome Reports |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3387789/ https://www.ncbi.nlm.nih.gov/pubmed/22768358 http://dx.doi.org/10.4056/sigs.2475579 |
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