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Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128(T))

Saccharomonospora azurea Runmao et al. 1987 is a member of the genus Saccharomonospora, which is in the family Pseudonocardiaceae and thus far poorly characterized genomically. Members of the genus Saccharomonospora are of interest because they originate from diverse habitats, such as leaf litter, m...

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Autores principales: Klenk, Hans-Peter, Held, Brittany, Lucas, Susan, Lapidus, Alla, Copeland, Alex, Hammon, Nancy, Pitluck, Sam, Goodwin, Lynne A., Han, Cliff, Tapia, Roxanne, Brambilla, Evelyne-Marie, Pötter, Gabriele, Land, Miriam, Ivanova, Natalia, Rohde, Manfred, Göker, Markus, Detter, John C., Kyrpides, Nikos C., Woyke, Tanja
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3387790/
https://www.ncbi.nlm.nih.gov/pubmed/22768365
http://dx.doi.org/10.4056/sigs.2635833
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author Klenk, Hans-Peter
Held, Brittany
Lucas, Susan
Lapidus, Alla
Copeland, Alex
Hammon, Nancy
Pitluck, Sam
Goodwin, Lynne A.
Han, Cliff
Tapia, Roxanne
Brambilla, Evelyne-Marie
Pötter, Gabriele
Land, Miriam
Ivanova, Natalia
Rohde, Manfred
Göker, Markus
Detter, John C.
Kyrpides, Nikos C.
Woyke, Tanja
author_facet Klenk, Hans-Peter
Held, Brittany
Lucas, Susan
Lapidus, Alla
Copeland, Alex
Hammon, Nancy
Pitluck, Sam
Goodwin, Lynne A.
Han, Cliff
Tapia, Roxanne
Brambilla, Evelyne-Marie
Pötter, Gabriele
Land, Miriam
Ivanova, Natalia
Rohde, Manfred
Göker, Markus
Detter, John C.
Kyrpides, Nikos C.
Woyke, Tanja
author_sort Klenk, Hans-Peter
collection PubMed
description Saccharomonospora azurea Runmao et al. 1987 is a member of the genus Saccharomonospora, which is in the family Pseudonocardiaceae and thus far poorly characterized genomically. Members of the genus Saccharomonospora are of interest because they originate from diverse habitats, such as leaf litter, manure, compost, the surface of peat, and moist and over-heated grain, and may play a role in the primary degradation of plant material by attacking hemicellulose. Next to S. viridis, S. azurea is only the second member in the genus Saccharomonospora for which a completely sequenced type strain genome will be published. Here we describe the features of this organism, together with the complete genome sequence with project status ‘Improved high quality draft’, and the annotation. The 4,763,832 bp long chromosome with its 4,472 protein-coding and 58 RNA genes was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI).
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spelling pubmed-33877902012-07-05 Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128(T)) Klenk, Hans-Peter Held, Brittany Lucas, Susan Lapidus, Alla Copeland, Alex Hammon, Nancy Pitluck, Sam Goodwin, Lynne A. Han, Cliff Tapia, Roxanne Brambilla, Evelyne-Marie Pötter, Gabriele Land, Miriam Ivanova, Natalia Rohde, Manfred Göker, Markus Detter, John C. Kyrpides, Nikos C. Woyke, Tanja Stand Genomic Sci Short Genome Reports Saccharomonospora azurea Runmao et al. 1987 is a member of the genus Saccharomonospora, which is in the family Pseudonocardiaceae and thus far poorly characterized genomically. Members of the genus Saccharomonospora are of interest because they originate from diverse habitats, such as leaf litter, manure, compost, the surface of peat, and moist and over-heated grain, and may play a role in the primary degradation of plant material by attacking hemicellulose. Next to S. viridis, S. azurea is only the second member in the genus Saccharomonospora for which a completely sequenced type strain genome will be published. Here we describe the features of this organism, together with the complete genome sequence with project status ‘Improved high quality draft’, and the annotation. The 4,763,832 bp long chromosome with its 4,472 protein-coding and 58 RNA genes was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI). Michigan State University 2012-05-05 /pmc/articles/PMC3387790/ /pubmed/22768365 http://dx.doi.org/10.4056/sigs.2635833 Text en
spellingShingle Short Genome Reports
Klenk, Hans-Peter
Held, Brittany
Lucas, Susan
Lapidus, Alla
Copeland, Alex
Hammon, Nancy
Pitluck, Sam
Goodwin, Lynne A.
Han, Cliff
Tapia, Roxanne
Brambilla, Evelyne-Marie
Pötter, Gabriele
Land, Miriam
Ivanova, Natalia
Rohde, Manfred
Göker, Markus
Detter, John C.
Kyrpides, Nikos C.
Woyke, Tanja
Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128(T))
title Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128(T))
title_full Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128(T))
title_fullStr Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128(T))
title_full_unstemmed Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128(T))
title_short Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128(T))
title_sort genome sequence of the soil bacterium saccharomonospora azurea type strain (na-128(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3387790/
https://www.ncbi.nlm.nih.gov/pubmed/22768365
http://dx.doi.org/10.4056/sigs.2635833
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