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Clinical relevance of single nucleotide polymorphisms within the entire NLRP3 gene in patients with major blunt trauma
INTRODUCTION: The nucleotide-binding oligomerization domain-like receptor (NLR) family has been recognized as comprising intracellular pattern recognition receptors in which NLRP3 (NLR family, pyrin domain containing 3) plays an important role in the initiation of host immune inflammatory responses....
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3388683/ https://www.ncbi.nlm.nih.gov/pubmed/22112657 http://dx.doi.org/10.1186/cc10564 |
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author | Zhang, An-Qiang Zeng, Ling Gu, Wei Zhang, Lian-Yang Zhou, Jian Jiang, Dong-po Du, Ding-Yuan Hu, Ping Yang, Ce Yan, Jun Wang, Hai-Yan Jiang, Jian-Xin |
author_facet | Zhang, An-Qiang Zeng, Ling Gu, Wei Zhang, Lian-Yang Zhou, Jian Jiang, Dong-po Du, Ding-Yuan Hu, Ping Yang, Ce Yan, Jun Wang, Hai-Yan Jiang, Jian-Xin |
author_sort | Zhang, An-Qiang |
collection | PubMed |
description | INTRODUCTION: The nucleotide-binding oligomerization domain-like receptor (NLR) family has been recognized as comprising intracellular pattern recognition receptors in which NLRP3 (NLR family, pyrin domain containing 3) plays an important role in the initiation of host immune inflammatory responses. The genetic variants have been recognized to be critical determinants of interindividual differences in both inflammatory responses and clinical outcomes in critical illness. However, little is known about the clinical relevance of NLRP3 gene polymorphisms in critical illness. METHODS: A total of 718 patients with major blunt trauma were included in this study. Six tag SNPs (tSNPs) were selected from the entire NLRP3 gene through construction of haplotype bins, and they were genotyped using a pyrosequencing method. They were analyzed in relation to sepsis morbidity rate, multiple organ dysfunction (MOD) scores and IL-1β production. Moreover, the functionality of the rs2027432 polymorphism was assessed by the observation of its effect on transcriptional activities. RESULTS: Among the six tSNPs genotyped in this study, two of them (rs2027432 and rs12048215) were significantly associated with sepsis morbidity rate and MOD scores. A significant association was also observed between these two polymorphisms and IL-1β production by peripheral leukocytes in response to ex vivo lipopolysaccharide stimulation. However, no combined effects were found between these two polymorphisms. In addition, the rs2027432 polymorphism could significantly enhance the promoter activities of the NLRP3 gene. CONCLUSIONS: rs2027432 and rs12048215 polymorphisms might be used as relevant risk estimates for the development of sepsis and MOD syndrome in patients with major trauma, in which rs2027432 might be a functional SNP. |
format | Online Article Text |
id | pubmed-3388683 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-33886832012-07-04 Clinical relevance of single nucleotide polymorphisms within the entire NLRP3 gene in patients with major blunt trauma Zhang, An-Qiang Zeng, Ling Gu, Wei Zhang, Lian-Yang Zhou, Jian Jiang, Dong-po Du, Ding-Yuan Hu, Ping Yang, Ce Yan, Jun Wang, Hai-Yan Jiang, Jian-Xin Crit Care Research INTRODUCTION: The nucleotide-binding oligomerization domain-like receptor (NLR) family has been recognized as comprising intracellular pattern recognition receptors in which NLRP3 (NLR family, pyrin domain containing 3) plays an important role in the initiation of host immune inflammatory responses. The genetic variants have been recognized to be critical determinants of interindividual differences in both inflammatory responses and clinical outcomes in critical illness. However, little is known about the clinical relevance of NLRP3 gene polymorphisms in critical illness. METHODS: A total of 718 patients with major blunt trauma were included in this study. Six tag SNPs (tSNPs) were selected from the entire NLRP3 gene through construction of haplotype bins, and they were genotyped using a pyrosequencing method. They were analyzed in relation to sepsis morbidity rate, multiple organ dysfunction (MOD) scores and IL-1β production. Moreover, the functionality of the rs2027432 polymorphism was assessed by the observation of its effect on transcriptional activities. RESULTS: Among the six tSNPs genotyped in this study, two of them (rs2027432 and rs12048215) were significantly associated with sepsis morbidity rate and MOD scores. A significant association was also observed between these two polymorphisms and IL-1β production by peripheral leukocytes in response to ex vivo lipopolysaccharide stimulation. However, no combined effects were found between these two polymorphisms. In addition, the rs2027432 polymorphism could significantly enhance the promoter activities of the NLRP3 gene. CONCLUSIONS: rs2027432 and rs12048215 polymorphisms might be used as relevant risk estimates for the development of sepsis and MOD syndrome in patients with major trauma, in which rs2027432 might be a functional SNP. BioMed Central 2011 2011-11-23 /pmc/articles/PMC3388683/ /pubmed/22112657 http://dx.doi.org/10.1186/cc10564 Text en Copyright ©2011 Zhang et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Zhang, An-Qiang Zeng, Ling Gu, Wei Zhang, Lian-Yang Zhou, Jian Jiang, Dong-po Du, Ding-Yuan Hu, Ping Yang, Ce Yan, Jun Wang, Hai-Yan Jiang, Jian-Xin Clinical relevance of single nucleotide polymorphisms within the entire NLRP3 gene in patients with major blunt trauma |
title | Clinical relevance of single nucleotide polymorphisms within the entire NLRP3 gene in patients with major blunt trauma |
title_full | Clinical relevance of single nucleotide polymorphisms within the entire NLRP3 gene in patients with major blunt trauma |
title_fullStr | Clinical relevance of single nucleotide polymorphisms within the entire NLRP3 gene in patients with major blunt trauma |
title_full_unstemmed | Clinical relevance of single nucleotide polymorphisms within the entire NLRP3 gene in patients with major blunt trauma |
title_short | Clinical relevance of single nucleotide polymorphisms within the entire NLRP3 gene in patients with major blunt trauma |
title_sort | clinical relevance of single nucleotide polymorphisms within the entire nlrp3 gene in patients with major blunt trauma |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3388683/ https://www.ncbi.nlm.nih.gov/pubmed/22112657 http://dx.doi.org/10.1186/cc10564 |
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