Mosaic: making biological sense of complex networks

Summary: We present a Cytoscape plugin called Mosaic to support interactive network annotation, partitioning, layout and coloring based on gene ontology or other relevant annotations. Availability: Mosaic is distributed for free under the Apache v2.0 open source license and can be downloaded via the...

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Detalles Bibliográficos
Autores principales: Zhang, Chao, Hanspers, Kristina, Kuchinsky, Allan, Salomonis, Nathan, Xu, Dong, Pico, Alexander R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2012
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3389769/
https://www.ncbi.nlm.nih.gov/pubmed/22576176
http://dx.doi.org/10.1093/bioinformatics/bts278
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author Zhang, Chao
Hanspers, Kristina
Kuchinsky, Allan
Salomonis, Nathan
Xu, Dong
Pico, Alexander R.
author_facet Zhang, Chao
Hanspers, Kristina
Kuchinsky, Allan
Salomonis, Nathan
Xu, Dong
Pico, Alexander R.
author_sort Zhang, Chao
collection PubMed
description Summary: We present a Cytoscape plugin called Mosaic to support interactive network annotation, partitioning, layout and coloring based on gene ontology or other relevant annotations. Availability: Mosaic is distributed for free under the Apache v2.0 open source license and can be downloaded via the Cytoscape plugin manager. A detailed user manual is available on the Mosaic web site (http://nrnb.org/tools/mosaic). Contact: apico@gladstone.ucsf.edu
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spelling pubmed-33897692012-07-05 Mosaic: making biological sense of complex networks Zhang, Chao Hanspers, Kristina Kuchinsky, Allan Salomonis, Nathan Xu, Dong Pico, Alexander R. Bioinformatics Applications Note Summary: We present a Cytoscape plugin called Mosaic to support interactive network annotation, partitioning, layout and coloring based on gene ontology or other relevant annotations. Availability: Mosaic is distributed for free under the Apache v2.0 open source license and can be downloaded via the Cytoscape plugin manager. A detailed user manual is available on the Mosaic web site (http://nrnb.org/tools/mosaic). Contact: apico@gladstone.ucsf.edu Oxford University Press 2012-07-15 2012-05-09 /pmc/articles/PMC3389769/ /pubmed/22576176 http://dx.doi.org/10.1093/bioinformatics/bts278 Text en © The Author(s) 2012. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Applications Note
Zhang, Chao
Hanspers, Kristina
Kuchinsky, Allan
Salomonis, Nathan
Xu, Dong
Pico, Alexander R.
Mosaic: making biological sense of complex networks
title Mosaic: making biological sense of complex networks
title_full Mosaic: making biological sense of complex networks
title_fullStr Mosaic: making biological sense of complex networks
title_full_unstemmed Mosaic: making biological sense of complex networks
title_short Mosaic: making biological sense of complex networks
title_sort mosaic: making biological sense of complex networks
topic Applications Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3389769/
https://www.ncbi.nlm.nih.gov/pubmed/22576176
http://dx.doi.org/10.1093/bioinformatics/bts278
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