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TaxMan: a server to trim rRNA reference databases and inspect taxonomic coverage
Amplicon sequencing of the hypervariable regions of the small subunit ribosomal RNA gene is a widely accepted method for identifying the members of complex bacterial communities. Several rRNA gene sequence reference databases can be used to assign taxonomic names to the sequencing reads using BLAST,...
Autores principales: | Brandt, Bernd W., Bonder, Marc J., Huse, Susan M., Zaura, Egija |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3394339/ https://www.ncbi.nlm.nih.gov/pubmed/22618877 http://dx.doi.org/10.1093/nar/gks418 |
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