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Construction of a Llama Bacterial Artificial Chromosome Library with Approximately 9-Fold Genome Equivalent Coverage

The Ilama is an important agricultural livestock in much of South America. The llama is increasing in popularity in the United States as a companion animal. Little work has been done to improve llama production using modern technology. A paucity of information is available regarding the llama genome...

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Autores principales: Airmet, K. W., Hinckley, J. D., Tree, L. T., Moss, M., Blumell, S., Ulicny, K., Gustafson, A. K., Weed, M., Theodosis, R., Lehnardt, M., Genho, J., Stevens, M. R., Kooyman, D. L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3395300/
https://www.ncbi.nlm.nih.gov/pubmed/22811594
http://dx.doi.org/10.1155/2012/371414
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author Airmet, K. W.
Hinckley, J. D.
Tree, L. T.
Moss, M.
Blumell, S.
Ulicny, K.
Gustafson, A. K.
Weed, M.
Theodosis, R.
Lehnardt, M.
Genho, J.
Stevens, M. R.
Kooyman, D. L.
author_facet Airmet, K. W.
Hinckley, J. D.
Tree, L. T.
Moss, M.
Blumell, S.
Ulicny, K.
Gustafson, A. K.
Weed, M.
Theodosis, R.
Lehnardt, M.
Genho, J.
Stevens, M. R.
Kooyman, D. L.
author_sort Airmet, K. W.
collection PubMed
description The Ilama is an important agricultural livestock in much of South America. The llama is increasing in popularity in the United States as a companion animal. Little work has been done to improve llama production using modern technology. A paucity of information is available regarding the llama genome. We report the construction of a llama bacterial artificial chromosome (BAC) library of about 196,224 clones in the vector pECBAC1. Using flow cytometry and bovine, human, mouse, and chicken as controls, we determined the llama genome size to be 2.4 × 10(9) bp. The average insert size of the library is 137.8 kb corresponding to approximately 9-fold genome coverage. Further studies are needed to further characterize the library and llama genome. We anticipate that this new library will help facilitate future genomic studies in the llama.
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spelling pubmed-33953002012-07-18 Construction of a Llama Bacterial Artificial Chromosome Library with Approximately 9-Fold Genome Equivalent Coverage Airmet, K. W. Hinckley, J. D. Tree, L. T. Moss, M. Blumell, S. Ulicny, K. Gustafson, A. K. Weed, M. Theodosis, R. Lehnardt, M. Genho, J. Stevens, M. R. Kooyman, D. L. J Biomed Biotechnol Research Article The Ilama is an important agricultural livestock in much of South America. The llama is increasing in popularity in the United States as a companion animal. Little work has been done to improve llama production using modern technology. A paucity of information is available regarding the llama genome. We report the construction of a llama bacterial artificial chromosome (BAC) library of about 196,224 clones in the vector pECBAC1. Using flow cytometry and bovine, human, mouse, and chicken as controls, we determined the llama genome size to be 2.4 × 10(9) bp. The average insert size of the library is 137.8 kb corresponding to approximately 9-fold genome coverage. Further studies are needed to further characterize the library and llama genome. We anticipate that this new library will help facilitate future genomic studies in the llama. Hindawi Publishing Corporation 2012 2012-06-28 /pmc/articles/PMC3395300/ /pubmed/22811594 http://dx.doi.org/10.1155/2012/371414 Text en Copyright © 2012 K. W. Airmet et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Airmet, K. W.
Hinckley, J. D.
Tree, L. T.
Moss, M.
Blumell, S.
Ulicny, K.
Gustafson, A. K.
Weed, M.
Theodosis, R.
Lehnardt, M.
Genho, J.
Stevens, M. R.
Kooyman, D. L.
Construction of a Llama Bacterial Artificial Chromosome Library with Approximately 9-Fold Genome Equivalent Coverage
title Construction of a Llama Bacterial Artificial Chromosome Library with Approximately 9-Fold Genome Equivalent Coverage
title_full Construction of a Llama Bacterial Artificial Chromosome Library with Approximately 9-Fold Genome Equivalent Coverage
title_fullStr Construction of a Llama Bacterial Artificial Chromosome Library with Approximately 9-Fold Genome Equivalent Coverage
title_full_unstemmed Construction of a Llama Bacterial Artificial Chromosome Library with Approximately 9-Fold Genome Equivalent Coverage
title_short Construction of a Llama Bacterial Artificial Chromosome Library with Approximately 9-Fold Genome Equivalent Coverage
title_sort construction of a llama bacterial artificial chromosome library with approximately 9-fold genome equivalent coverage
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3395300/
https://www.ncbi.nlm.nih.gov/pubmed/22811594
http://dx.doi.org/10.1155/2012/371414
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