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Dispersal limitation and the assembly of soil Actinobacteria communities in a long-term chronosequence

It is uncertain whether the same ecological forces that structure plant and animal communities also shape microbial communities, especially those residing in soil. We sought to uncover the relative importance of present-day environmental characteristics, climatic variation, and historical contingenc...

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Autores principales: Eisenlord, Sarah D, Zak, Donald R, Upchurch, Rima A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Blackwell Publishing Ltd 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3399143/
https://www.ncbi.nlm.nih.gov/pubmed/22822433
http://dx.doi.org/10.1002/ece3.210
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author Eisenlord, Sarah D
Zak, Donald R
Upchurch, Rima A
author_facet Eisenlord, Sarah D
Zak, Donald R
Upchurch, Rima A
author_sort Eisenlord, Sarah D
collection PubMed
description It is uncertain whether the same ecological forces that structure plant and animal communities also shape microbial communities, especially those residing in soil. We sought to uncover the relative importance of present-day environmental characteristics, climatic variation, and historical contingencies in shaping soil actinobacterial communities in a long-term chronosequence. Actinobacteria communities were characterized in surface soil samples from four replicate forest stands with nearly identical edaphic and ecological properties, which range from 9500 to 14,000 years following glacial retreat in Michigan. Terminal restriction fragment length polymorphism (TRFLP) profiles and clone libraries of the actinobacterial 16S rRNA gene were constructed in each site for phenetic and phylogenetic analysis to determine whether dispersal limitation occurred following glacial retreat, or if community composition was determined by environmental heterogeneity. At every level of examination, actinobacterial community composition most closely correlated with distance, a surrogate for time, than with biogeochemical, plant community, or climatic characteristics. Despite correlation with leaf litter C:N and annual temperature, the significant and consistent relationship of biological communities with time since glacial retreat provides evidence that dispersal limitation is an ecological force structuring actinobacterial communities in soil over long periods of time.
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spelling pubmed-33991432012-07-20 Dispersal limitation and the assembly of soil Actinobacteria communities in a long-term chronosequence Eisenlord, Sarah D Zak, Donald R Upchurch, Rima A Ecol Evol Original Research It is uncertain whether the same ecological forces that structure plant and animal communities also shape microbial communities, especially those residing in soil. We sought to uncover the relative importance of present-day environmental characteristics, climatic variation, and historical contingencies in shaping soil actinobacterial communities in a long-term chronosequence. Actinobacteria communities were characterized in surface soil samples from four replicate forest stands with nearly identical edaphic and ecological properties, which range from 9500 to 14,000 years following glacial retreat in Michigan. Terminal restriction fragment length polymorphism (TRFLP) profiles and clone libraries of the actinobacterial 16S rRNA gene were constructed in each site for phenetic and phylogenetic analysis to determine whether dispersal limitation occurred following glacial retreat, or if community composition was determined by environmental heterogeneity. At every level of examination, actinobacterial community composition most closely correlated with distance, a surrogate for time, than with biogeochemical, plant community, or climatic characteristics. Despite correlation with leaf litter C:N and annual temperature, the significant and consistent relationship of biological communities with time since glacial retreat provides evidence that dispersal limitation is an ecological force structuring actinobacterial communities in soil over long periods of time. Blackwell Publishing Ltd 2012-03 /pmc/articles/PMC3399143/ /pubmed/22822433 http://dx.doi.org/10.1002/ece3.210 Text en © 2012 The Author. Published by Blackwell Publishing Ltd. http://creativecommons.org/licenses/by/2.5/ This is an open access article under the terms of the Creative Commons Attribution Non Commercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Original Research
Eisenlord, Sarah D
Zak, Donald R
Upchurch, Rima A
Dispersal limitation and the assembly of soil Actinobacteria communities in a long-term chronosequence
title Dispersal limitation and the assembly of soil Actinobacteria communities in a long-term chronosequence
title_full Dispersal limitation and the assembly of soil Actinobacteria communities in a long-term chronosequence
title_fullStr Dispersal limitation and the assembly of soil Actinobacteria communities in a long-term chronosequence
title_full_unstemmed Dispersal limitation and the assembly of soil Actinobacteria communities in a long-term chronosequence
title_short Dispersal limitation and the assembly of soil Actinobacteria communities in a long-term chronosequence
title_sort dispersal limitation and the assembly of soil actinobacteria communities in a long-term chronosequence
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3399143/
https://www.ncbi.nlm.nih.gov/pubmed/22822433
http://dx.doi.org/10.1002/ece3.210
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