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Post-hoc selection of dynamic causal models

Dynamic causal modelling (DCM) was originally proposed as a hypothesis driven procedure in which a small number of neurobiologically motivated models are compared. Model comparison in this context usually proceeds by individually fitting each model to data and then approximating the corresponding mo...

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Detalles Bibliográficos
Autores principales: Rosa, M.J., Friston, K., Penny, W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier/North-Holland Biomedical Press 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3401996/
https://www.ncbi.nlm.nih.gov/pubmed/22561579
http://dx.doi.org/10.1016/j.jneumeth.2012.04.013
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author Rosa, M.J.
Friston, K.
Penny, W.
author_facet Rosa, M.J.
Friston, K.
Penny, W.
author_sort Rosa, M.J.
collection PubMed
description Dynamic causal modelling (DCM) was originally proposed as a hypothesis driven procedure in which a small number of neurobiologically motivated models are compared. Model comparison in this context usually proceeds by individually fitting each model to data and then approximating the corresponding model evidence with a free energy bound. However, a recent trend has emerged for comparing very large numbers of models in a more exploratory manner. This led Friston and Penny (2011) to propose a post-hoc approximation to the model evidence, which is computed by optimising only the largest (full) model of a set of models. The evidence for any (reduced) submodel is then obtained using a generalisation of the Savage-Dickey density ratio (Dickey, 1971). The benefit of this post-hoc approach is a huge reduction in the computational time required for model fitting. This is because only a single model is fitted to data, allowing a potentially huge model space to be searched relatively quickly. In this paper, we explore the relationship between the free energy bound and post-hoc approximations to the model evidence in the context of deterministic (bilinear) dynamic causal models (DCMs) for functional magnetic resonance imaging data.
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spelling pubmed-34019962012-07-24 Post-hoc selection of dynamic causal models Rosa, M.J. Friston, K. Penny, W. J Neurosci Methods Computational Neuroscience Dynamic causal modelling (DCM) was originally proposed as a hypothesis driven procedure in which a small number of neurobiologically motivated models are compared. Model comparison in this context usually proceeds by individually fitting each model to data and then approximating the corresponding model evidence with a free energy bound. However, a recent trend has emerged for comparing very large numbers of models in a more exploratory manner. This led Friston and Penny (2011) to propose a post-hoc approximation to the model evidence, which is computed by optimising only the largest (full) model of a set of models. The evidence for any (reduced) submodel is then obtained using a generalisation of the Savage-Dickey density ratio (Dickey, 1971). The benefit of this post-hoc approach is a huge reduction in the computational time required for model fitting. This is because only a single model is fitted to data, allowing a potentially huge model space to be searched relatively quickly. In this paper, we explore the relationship between the free energy bound and post-hoc approximations to the model evidence in the context of deterministic (bilinear) dynamic causal models (DCMs) for functional magnetic resonance imaging data. Elsevier/North-Holland Biomedical Press 2012-06-30 /pmc/articles/PMC3401996/ /pubmed/22561579 http://dx.doi.org/10.1016/j.jneumeth.2012.04.013 Text en © 2012 Elsevier B.V. https://creativecommons.org/licenses/by/3.0/ Open Access under CC BY 3.0 (https://creativecommons.org/licenses/by/3.0/) license
spellingShingle Computational Neuroscience
Rosa, M.J.
Friston, K.
Penny, W.
Post-hoc selection of dynamic causal models
title Post-hoc selection of dynamic causal models
title_full Post-hoc selection of dynamic causal models
title_fullStr Post-hoc selection of dynamic causal models
title_full_unstemmed Post-hoc selection of dynamic causal models
title_short Post-hoc selection of dynamic causal models
title_sort post-hoc selection of dynamic causal models
topic Computational Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3401996/
https://www.ncbi.nlm.nih.gov/pubmed/22561579
http://dx.doi.org/10.1016/j.jneumeth.2012.04.013
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