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Lysyl Oxidase Polymorphisms and Susceptibility to Osteosarcoma
Despite the knowledge of many genetic alterations present in osteosarcoma, the complexity of this disease precludes placing its biology into a simple conceptual framework. Lysyl oxidase (LOX) catalyzes the cross-linking of elastin and collagen, which is essential for the structural integrity and fun...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3402457/ https://www.ncbi.nlm.nih.gov/pubmed/22911823 http://dx.doi.org/10.1371/journal.pone.0041610 |
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author | Liu, Yang Lv, Bitao He, Zhimin Zhou, Yujia Han, Carrie Shi, Guodong Gao, Rui Wang, Ce Yang, Lili Song, Haihan Yuan, Wen |
author_facet | Liu, Yang Lv, Bitao He, Zhimin Zhou, Yujia Han, Carrie Shi, Guodong Gao, Rui Wang, Ce Yang, Lili Song, Haihan Yuan, Wen |
author_sort | Liu, Yang |
collection | PubMed |
description | Despite the knowledge of many genetic alterations present in osteosarcoma, the complexity of this disease precludes placing its biology into a simple conceptual framework. Lysyl oxidase (LOX) catalyzes the cross-linking of elastin and collagen, which is essential for the structural integrity and function of bone tissue. In the current study, we performed genomic sequencing on all seven exons -including the intron-exon splice sites, and the putative promoter region of LOX gene - followed by luciferase reporter assay to analyze the function of newly identified polymorphisms. Associations between LOX polymorphisms and osteosarcoma were then evaluated. Our sequencing data revealed three polymorphisms (−22G/C, 225C/G, and 473G/A) in the exons and promoter region of LOX. The −22G/C polymorphism lies in the downstream core promoter element (DPE) region and caused a decrease in promoter activity of LOX. The prevalence of the −22C allele and 473A allele were significantly increased in osteosarcoma patients compared to controls (odds ratio [OR] = 3.88, 95% confidence interval [CI] = 1.94−7.78, p = 4.18×10(−5), and OR = 1.38, 95%CI = 1.07−1.78, p = 0.013; p 0.0167 was considered significant after Bonferroni correction). Analyzing haplotype showed that the frequency of CCG haplotype (−22, 225, 473) was significantly higher in osteosarcoma cases than in healthy controls after Bonferroni correction (p = 4.46×10(−4)). These results indicate that the −22G/C polymorphism may affect the expression of LOX, and that −22G/C and 473G/A polymorphisms may be new risk factors for osteosarcoma. These findings reveal a potential new pathway by which genetic polymorphisms may affect human diseases. |
format | Online Article Text |
id | pubmed-3402457 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-34024572012-07-30 Lysyl Oxidase Polymorphisms and Susceptibility to Osteosarcoma Liu, Yang Lv, Bitao He, Zhimin Zhou, Yujia Han, Carrie Shi, Guodong Gao, Rui Wang, Ce Yang, Lili Song, Haihan Yuan, Wen PLoS One Research Article Despite the knowledge of many genetic alterations present in osteosarcoma, the complexity of this disease precludes placing its biology into a simple conceptual framework. Lysyl oxidase (LOX) catalyzes the cross-linking of elastin and collagen, which is essential for the structural integrity and function of bone tissue. In the current study, we performed genomic sequencing on all seven exons -including the intron-exon splice sites, and the putative promoter region of LOX gene - followed by luciferase reporter assay to analyze the function of newly identified polymorphisms. Associations between LOX polymorphisms and osteosarcoma were then evaluated. Our sequencing data revealed three polymorphisms (−22G/C, 225C/G, and 473G/A) in the exons and promoter region of LOX. The −22G/C polymorphism lies in the downstream core promoter element (DPE) region and caused a decrease in promoter activity of LOX. The prevalence of the −22C allele and 473A allele were significantly increased in osteosarcoma patients compared to controls (odds ratio [OR] = 3.88, 95% confidence interval [CI] = 1.94−7.78, p = 4.18×10(−5), and OR = 1.38, 95%CI = 1.07−1.78, p = 0.013; p 0.0167 was considered significant after Bonferroni correction). Analyzing haplotype showed that the frequency of CCG haplotype (−22, 225, 473) was significantly higher in osteosarcoma cases than in healthy controls after Bonferroni correction (p = 4.46×10(−4)). These results indicate that the −22G/C polymorphism may affect the expression of LOX, and that −22G/C and 473G/A polymorphisms may be new risk factors for osteosarcoma. These findings reveal a potential new pathway by which genetic polymorphisms may affect human diseases. Public Library of Science 2012-07-23 /pmc/articles/PMC3402457/ /pubmed/22911823 http://dx.doi.org/10.1371/journal.pone.0041610 Text en Liu et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Liu, Yang Lv, Bitao He, Zhimin Zhou, Yujia Han, Carrie Shi, Guodong Gao, Rui Wang, Ce Yang, Lili Song, Haihan Yuan, Wen Lysyl Oxidase Polymorphisms and Susceptibility to Osteosarcoma |
title | Lysyl Oxidase Polymorphisms and Susceptibility to Osteosarcoma |
title_full | Lysyl Oxidase Polymorphisms and Susceptibility to Osteosarcoma |
title_fullStr | Lysyl Oxidase Polymorphisms and Susceptibility to Osteosarcoma |
title_full_unstemmed | Lysyl Oxidase Polymorphisms and Susceptibility to Osteosarcoma |
title_short | Lysyl Oxidase Polymorphisms and Susceptibility to Osteosarcoma |
title_sort | lysyl oxidase polymorphisms and susceptibility to osteosarcoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3402457/ https://www.ncbi.nlm.nih.gov/pubmed/22911823 http://dx.doi.org/10.1371/journal.pone.0041610 |
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