Cargando…

The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins

Hassawi rice (Oryza sativa L.) is a landrace adapted to the climate of Saudi Arabia, characterized by its strong resistance to soil salinity and drought. Using high quality sequencing reads extracted from raw data of a whole genome sequencing project, we assembled both chloroplast (cp) and mitochond...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zhang, Tongwu, Hu, Songnian, Zhang, Guangyu, Pan, Linlin, Zhang, Xiaowei, Al-Mssallem, Ibrahim S., Yu, Jun
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2012
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3409126/ https://www.ncbi.nlm.nih.gov/pubmed/22870184 http://dx.doi.org/10.1371/journal.pone.0042041

Ejemplares similares

Assessment of ISSR based molecular genetic diversity of Hassawi rice in Saudi Arabia
por: Al-Turki, T.A., et al.
Publicado: (2015)

A Complete Sequence and Transcriptomic Analyses of Date Palm (Phoenix dactylifera L.) Mitochondrial Genome
por: Fang, Yongjun, et al.
Publicado: (2012)

An efficient procedure for plant organellar genome assembly, based on whole genome data from the 454 GS FLX sequencing platform
por: Zhang, Tongwu, et al.
Publicado: (2011)

Origin of Oryza sativa in China Inferred by Nucleotide Polymorphisms of Organelle DNA
por: Wei, Xin, et al.
Publicado: (2012)

The Genomes of Oryza sativa: A History of Duplications
por: Yu, Jun, et al.
Publicado: (2005)

Toxic Metals and Metalloids in Hassawi Brown Rice: Fate during Cooking and Associated Health Risks
por: AlMulla, Abdulaziz Abdulrahman, et al.
Publicado: (2022)

Genome-wide association mapping of salinity tolerance in rice (Oryza sativa)
por: Kumar, Vinod, et al.
Publicado: (2015)

Evolutionary Genomics of Structural Variation in Asian Rice (Oryza sativa) Domestication
por: Kou, Yixuan, et al.
Publicado: (2020)

The complete chloroplast genome of weedy rice Oryza sativa f. spontanea
por: Dong, Chenfeng, et al.
Publicado: (2021)

Genome-Wide Identification and Evolution Analysis of the CYP76 Subfamily in Rice (Oryza sativa)
por: Zhou, Mingao, et al.
Publicado: (2023)

Integrating genome-wide association study into genomic selection for the prediction of agronomic traits in rice (Oryza sativa L.)
por: Zhang, Yuanyuan, et al.
Publicado: (2023)

Chloroplast genome sequence of a yellow colored rice (Oryza sativa L.): insight into the genome structure and phylogeny
por: Fan, Jing, et al.
Publicado: (2020)

Genome-Wide Analysis of the IQM Gene Family in Rice (Oryza sativa L.)
por: Fan, Tian, et al.
Publicado: (2021)

In Silico Verification of Predicted Potential Promoter Sequences in the Rice (Oryza sativa) Genome
por: Bubnova, Anastasiya N., et al.
Publicado: (2023)

Introgression Lines: Valuable Resources for Functional Genomics Research and Breeding in Rice (Oryza sativa L.)
por: Zhang, Bo, et al.
Publicado: (2022)

Genome-wide response to selection and genetic basis of cold tolerance in rice (Oryza sativa L.)
por: Zhang, Fan, et al.
Publicado: (2014)

Genome-Wide Association Study of Seed Dormancy and the Genomic Consequences of Improvement Footprints in Rice (Oryza sativa L.)
por: Lu, Qing, et al.
Publicado: (2018)

Genome-wide association analysis of panicle exsertion and uppermost internode in rice (Oryza sativa L.)
por: Zhan, Chengfang, et al.
Publicado: (2019)

The Complete Chloroplast and Mitochondrial Genome Sequences of Boea hygrometrica: Insights into the Evolution of Plant Organellar Genomes
por: Zhang, Tongwu, et al.
Publicado: (2012)

Complete Genome Sequence of Rice Tungro Bacilliform Virus Infecting Asian Rice (Oryza sativa) in Malaysia
por: Kannan, Maathavi, et al.
Publicado: (2019)

Genome-wide analysis of fatty acid desaturase genes in rice (Oryza sativa L.)
por: E, Zhiguo, et al.
Publicado: (2019)

Genomic Prediction of Yield Traits in Single-Cross Hybrid Rice (Oryza sativa L.)
por: Labroo, Marlee R., et al.
Publicado: (2021)

The complete chloroplast genome of japonica type weedy rice (Oryza sativa f. spontanea)
por: Hu, Yiyu, et al.
Publicado: (2022)

Visualization of Multicolored in vivo Organelle Markers for Co-Localization Studies in Oryza sativa
por: Dangol, Sarmina, et al.
Publicado: (2017)

Unveiling the genetic architecture for lodging resistance in rice (Oryza sativa. L) by genome-wide association analyses
por: Rashid, Muhammad Abdul Rehman, et al.
Publicado: (2022)

Protein profile of rice (Oryza sativa) seeds
por: Yang, Yanhua, et al.
Publicado: (2013)

Brassinosteroids are involved in Fe homeostasis in rice (Oryza sativa L.)
por: Wang, Baolan, et al.
Publicado: (2015)

Selective and comparative genome architecture of Asian cultivated rice (Oryza sativa L.) attributed to domestication and modern breeding
por: Wang, Xueqiang, et al.
Publicado: (2022)

Data for global lysine-acetylation analysis in rice (Oryza sativa)
por: Xiong, Yehui, et al.
Publicado: (2016)

Characterization of Transposon-Derived Accessible Chromatin Regions in Rice (Oryza Sativa)
por: Zhang, Aicen, et al.
Publicado: (2022)

Genome-Wide Identification, Classification, and Expression Analysis of Autophagy-Associated Gene Homologues in Rice (Oryza sativa L.)
por: Xia, Kuaifei, et al.
Publicado: (2011)

The complete chloroplast genome sequence of Oryza sativa Temperate japonica
por: Feng, Qi, et al.
Publicado: (2021)

Evolutionary history of Oryza sativa LTR retrotransposons: a preliminary survey of the rice genome sequences
por: Gao, Lizhi, et al.
Publicado: (2004)

Significant Comparative Characteristics between Orphan and Nonorphan Genes in the Rice (Oryza sativa L.) Genome
por: Guo, Wen-Jiu, et al.
Publicado: (2007)

Biallelic and Genome Wide Association Mapping of Germanium Tolerant Loci in Rice (Oryza sativa L.)
por: Talukdar, Partha, et al.
Publicado: (2015)

Genome-wide analysis of potential cross-reactive endogenous allergens in rice (Oryza sativa L.)()
por: Zhu, Fang Chao, et al.
Publicado: (2015)

Genome-wide association study of cooking-caused grain expansion in rice (Oryza sativa L.)
por: Zheng, Yan, et al.
Publicado: (2023)

Large-scale collection and annotation of gene models for date palm (Phoenix dactylifera, L.)
por: Zhang, Guangyu, et al.
Publicado: (2012)

Genomic Rearrangements and Sequence Evolution across Brown Algal Organelles
por: Starko, Samuel, et al.
Publicado: (2021)

Differential gene expression in an elite hybrid rice cultivar (Oryza sativa, L) and its parental lines based on SAGE data
por: Song, Shuhui, et al.
Publicado: (2007)

Cannot write session to /tmp/vufind_sessions/sess_8ok51keapnfsgfl5uoud6ijebj