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Diversity and systematics of the sequestrate genus Octaviania in Japan: two new subgenera and eleven new species
The sequestrate fungi of Japan, including truffle and truffle-like fungi, have not been well characterized but are potentially diverse. We investigated the diversity and phylogeny of Japanese Octaviania specimens using a multifaceted approach including scanning and transmission electron microscopy a...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3409418/ https://www.ncbi.nlm.nih.gov/pubmed/23105156 http://dx.doi.org/10.3767/003158512X650121 |
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author | Orihara, T. Smith, M.E. Shimomura, N. Iwase, K. Maekawa, N. |
author_facet | Orihara, T. Smith, M.E. Shimomura, N. Iwase, K. Maekawa, N. |
author_sort | Orihara, T. |
collection | PubMed |
description | The sequestrate fungi of Japan, including truffle and truffle-like fungi, have not been well characterized but are potentially diverse. We investigated the diversity and phylogeny of Japanese Octaviania specimens using a multifaceted approach including scanning and transmission electron microscopy as well as analysis of nuclear ribosomal DNA (ITS and LSU) and EF-1α (tef1) sequences. Phylogenetic analyses indicate that the genus Octaviania is divided into three major clades, and that there are at least 12 species-level lineages in Japan. Accordingly, we describe two new subgenera, Parcaea and Fulvoglobus, and eleven new species. Subgenus Parcaea accommodates four highly divergent, but macromorphologically almost indiscernible cryptic species. We discuss not only the diversity and species delimitation within the genus Octaviania but also the phylogeography of the Japanese taxa and their relatives. |
format | Online Article Text |
id | pubmed-3409418 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures |
record_format | MEDLINE/PubMed |
spelling | pubmed-34094182012-10-26 Diversity and systematics of the sequestrate genus Octaviania in Japan: two new subgenera and eleven new species Orihara, T. Smith, M.E. Shimomura, N. Iwase, K. Maekawa, N. Persoonia Research Article The sequestrate fungi of Japan, including truffle and truffle-like fungi, have not been well characterized but are potentially diverse. We investigated the diversity and phylogeny of Japanese Octaviania specimens using a multifaceted approach including scanning and transmission electron microscopy as well as analysis of nuclear ribosomal DNA (ITS and LSU) and EF-1α (tef1) sequences. Phylogenetic analyses indicate that the genus Octaviania is divided into three major clades, and that there are at least 12 species-level lineages in Japan. Accordingly, we describe two new subgenera, Parcaea and Fulvoglobus, and eleven new species. Subgenus Parcaea accommodates four highly divergent, but macromorphologically almost indiscernible cryptic species. We discuss not only the diversity and species delimitation within the genus Octaviania but also the phylogeography of the Japanese taxa and their relatives. Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures 2012-05-16 2012-06 /pmc/articles/PMC3409418/ /pubmed/23105156 http://dx.doi.org/10.3767/003158512X650121 Text en © 2012 Nationaal Herbarium Nederland & Centraalbureau voor Schimmelcultures http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author’s moral rights. |
spellingShingle | Research Article Orihara, T. Smith, M.E. Shimomura, N. Iwase, K. Maekawa, N. Diversity and systematics of the sequestrate genus Octaviania in Japan: two new subgenera and eleven new species |
title | Diversity and systematics of the sequestrate genus Octaviania in Japan: two new subgenera and eleven new species |
title_full | Diversity and systematics of the sequestrate genus Octaviania in Japan: two new subgenera and eleven new species |
title_fullStr | Diversity and systematics of the sequestrate genus Octaviania in Japan: two new subgenera and eleven new species |
title_full_unstemmed | Diversity and systematics of the sequestrate genus Octaviania in Japan: two new subgenera and eleven new species |
title_short | Diversity and systematics of the sequestrate genus Octaviania in Japan: two new subgenera and eleven new species |
title_sort | diversity and systematics of the sequestrate genus octaviania in japan: two new subgenera and eleven new species |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3409418/ https://www.ncbi.nlm.nih.gov/pubmed/23105156 http://dx.doi.org/10.3767/003158512X650121 |
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