Cargando…
Proteomic Investigation of Falciparum and Vivax Malaria for Identification of Surrogate Protein Markers
This study was conducted to analyze alterations in the human serum proteome as a consequence of infection by malaria parasites Plasmodium falciparum and P. vivax to obtain mechanistic insights about disease pathogenesis, host immune response, and identification of potential protein markers. Serum sa...
Autores principales: | , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3415403/ https://www.ncbi.nlm.nih.gov/pubmed/22912677 http://dx.doi.org/10.1371/journal.pone.0041751 |
_version_ | 1782240354360098816 |
---|---|
author | Ray, Sandipan Renu, Durairaj Srivastava, Rajneesh Gollapalli, Kishore Taur, Santosh Jhaveri, Tulip Dhali, Snigdha Chennareddy, Srinivasarao Potla, Ankit Dikshit, Jyoti Bajpai Srikanth, Rapole Gogtay, Nithya Thatte, Urmila Patankar, Swati Srivastava, Sanjeeva |
author_facet | Ray, Sandipan Renu, Durairaj Srivastava, Rajneesh Gollapalli, Kishore Taur, Santosh Jhaveri, Tulip Dhali, Snigdha Chennareddy, Srinivasarao Potla, Ankit Dikshit, Jyoti Bajpai Srikanth, Rapole Gogtay, Nithya Thatte, Urmila Patankar, Swati Srivastava, Sanjeeva |
author_sort | Ray, Sandipan |
collection | PubMed |
description | This study was conducted to analyze alterations in the human serum proteome as a consequence of infection by malaria parasites Plasmodium falciparum and P. vivax to obtain mechanistic insights about disease pathogenesis, host immune response, and identification of potential protein markers. Serum samples from patients diagnosed with falciparum malaria (FM) (n = 20), vivax malaria (VM) (n = 17) and healthy controls (HC) (n = 20) were investigated using multiple proteomic techniques and results were validated by employing immunoassay-based approaches. Specificity of the identified malaria related serum markers was evaluated by means of analysis of leptospirosis as a febrile control (FC). Compared to HC, 30 and 31 differentially expressed and statistically significant (p<0.05) serum proteins were identified in FM and VM respectively, and almost half (46.2%) of these proteins were commonly modulated due to both of the plasmodial infections. 13 proteins were found to be differentially expressed in FM compared to VM. Functional pathway analysis involving the identified proteins revealed the modulation of different vital physiological pathways, including acute phase response signaling, chemokine and cytokine signaling, complement cascades and blood coagulation in malaria. A panel of identified proteins consists of six candidates; serum amyloid A, hemopexin, apolipoprotein E, haptoglobin, retinol-binding protein and apolipoprotein A-I was used to build statistical sample class prediction models. By employing PLS-DA and other classification methods the clinical phenotypic classes (FM, VM, FC and HC) were predicted with over 95% prediction accuracy. Individual performance of three classifier proteins; haptoglobin, apolipoprotein A-I and retinol-binding protein in diagnosis of malaria was analyzed using receiver operating characteristic (ROC) curves. The discrimination of FM, VM, FC and HC groups on the basis of differentially expressed serum proteins demonstrates the potential of this analytical approach for the detection of malaria as well as other human diseases. |
format | Online Article Text |
id | pubmed-3415403 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-34154032012-08-21 Proteomic Investigation of Falciparum and Vivax Malaria for Identification of Surrogate Protein Markers Ray, Sandipan Renu, Durairaj Srivastava, Rajneesh Gollapalli, Kishore Taur, Santosh Jhaveri, Tulip Dhali, Snigdha Chennareddy, Srinivasarao Potla, Ankit Dikshit, Jyoti Bajpai Srikanth, Rapole Gogtay, Nithya Thatte, Urmila Patankar, Swati Srivastava, Sanjeeva PLoS One Research Article This study was conducted to analyze alterations in the human serum proteome as a consequence of infection by malaria parasites Plasmodium falciparum and P. vivax to obtain mechanistic insights about disease pathogenesis, host immune response, and identification of potential protein markers. Serum samples from patients diagnosed with falciparum malaria (FM) (n = 20), vivax malaria (VM) (n = 17) and healthy controls (HC) (n = 20) were investigated using multiple proteomic techniques and results were validated by employing immunoassay-based approaches. Specificity of the identified malaria related serum markers was evaluated by means of analysis of leptospirosis as a febrile control (FC). Compared to HC, 30 and 31 differentially expressed and statistically significant (p<0.05) serum proteins were identified in FM and VM respectively, and almost half (46.2%) of these proteins were commonly modulated due to both of the plasmodial infections. 13 proteins were found to be differentially expressed in FM compared to VM. Functional pathway analysis involving the identified proteins revealed the modulation of different vital physiological pathways, including acute phase response signaling, chemokine and cytokine signaling, complement cascades and blood coagulation in malaria. A panel of identified proteins consists of six candidates; serum amyloid A, hemopexin, apolipoprotein E, haptoglobin, retinol-binding protein and apolipoprotein A-I was used to build statistical sample class prediction models. By employing PLS-DA and other classification methods the clinical phenotypic classes (FM, VM, FC and HC) were predicted with over 95% prediction accuracy. Individual performance of three classifier proteins; haptoglobin, apolipoprotein A-I and retinol-binding protein in diagnosis of malaria was analyzed using receiver operating characteristic (ROC) curves. The discrimination of FM, VM, FC and HC groups on the basis of differentially expressed serum proteins demonstrates the potential of this analytical approach for the detection of malaria as well as other human diseases. Public Library of Science 2012-08-09 /pmc/articles/PMC3415403/ /pubmed/22912677 http://dx.doi.org/10.1371/journal.pone.0041751 Text en © 2012 Ray et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Ray, Sandipan Renu, Durairaj Srivastava, Rajneesh Gollapalli, Kishore Taur, Santosh Jhaveri, Tulip Dhali, Snigdha Chennareddy, Srinivasarao Potla, Ankit Dikshit, Jyoti Bajpai Srikanth, Rapole Gogtay, Nithya Thatte, Urmila Patankar, Swati Srivastava, Sanjeeva Proteomic Investigation of Falciparum and Vivax Malaria for Identification of Surrogate Protein Markers |
title | Proteomic Investigation of Falciparum and Vivax Malaria for Identification of Surrogate Protein Markers |
title_full | Proteomic Investigation of Falciparum and Vivax Malaria for Identification of Surrogate Protein Markers |
title_fullStr | Proteomic Investigation of Falciparum and Vivax Malaria for Identification of Surrogate Protein Markers |
title_full_unstemmed | Proteomic Investigation of Falciparum and Vivax Malaria for Identification of Surrogate Protein Markers |
title_short | Proteomic Investigation of Falciparum and Vivax Malaria for Identification of Surrogate Protein Markers |
title_sort | proteomic investigation of falciparum and vivax malaria for identification of surrogate protein markers |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3415403/ https://www.ncbi.nlm.nih.gov/pubmed/22912677 http://dx.doi.org/10.1371/journal.pone.0041751 |
work_keys_str_mv | AT raysandipan proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT renudurairaj proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT srivastavarajneesh proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT gollapallikishore proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT taursantosh proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT jhaveritulip proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT dhalisnigdha proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT chennareddysrinivasarao proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT potlaankit proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT dikshitjyotibajpai proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT srikanthrapole proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT gogtaynithya proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT thatteurmila proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT patankarswati proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers AT srivastavasanjeeva proteomicinvestigationoffalciparumandvivaxmalariaforidentificationofsurrogateproteinmarkers |