Cargando…

Towards a Better Detection of Horizontally Transferred Genes by Combining Unusual Properties Effectively

BACKGROUND: Horizontal gene transfer (HGT) is one of the major mechanisms contributing to microbial genome diversification. A number of computational methods for finding horizontally transferred genes have been proposed in the past decades; however none of them has provided a reliable detector yet....

Descripción completa

Detalles Bibliográficos
Autores principales:	Xiong, Dapeng, Xiao, Fen, Liu, Li, Hu, Kai, Tan, Yanping, He, Shunmin, Gao, Xieping
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2012
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3419211/ https://www.ncbi.nlm.nih.gov/pubmed/22905214 http://dx.doi.org/10.1371/journal.pone.0043126

Ejemplares similares

Correction: Towards a Better Detection of Horizontally Transferred Genes by Combining Unusual Properties Effectively
por: Xiong, Dapeng, et al.
Publicado: (2019)

LDNFSGB: prediction of long non-coding rna and disease association using network feature similarity and gradient boosting
por: Zhang, Yuan, et al.
Publicado: (2020)

Multiple Interkingdom Horizontal Gene Transfers in Pyrenophora and Closely Related Species and Their Contributions to Phytopathogenic Lifestyles
por: Sun, Bao-Fa, et al.
Publicado: (2013)

Contribution of Multiple Inter-Kingdom Horizontal Gene Transfers to Evolution and Adaptation of Amphibian-Killing Chytrid, Batrachochytrium dendrobatidis
por: Sun, Baofa, et al.
Publicado: (2016)

The power of phylogenetic approaches to detect horizontally transferred genes
por: Poptsova, Maria S, et al.
Publicado: (2007)

A Benchmark of Parametric Methods for Horizontal Transfers Detection
por: Becq, Jennifer, et al.
Publicado: (2010)

Detection of Horizontal Gene Transfers from Phylogenetic Comparisons
por: Pylro, Victor Satler, et al.
Publicado: (2012)

Bioinformatic detection of horizontally transferred DNA in bacterial genomes
por: Langille, Morgan GI, et al.
Publicado: (2009)

Horizontal Transposon Transfer in Eukarya: Detection, Bias, and Perspectives
por: Wallau, Gabriel Luz, et al.
Publicado: (2012)

Detecting horizontal gene transfer: a probabilistic approach
por: Sevillya, Gur, et al.
Publicado: (2020)

Horizontal Gene Transfer
por: Burmeister, Alita R.
Publicado: (2015)

Towards an accurate identification of mosaic genes and partial horizontal gene transfers
por: Boc, Alix, et al.
Publicado: (2011)

Detection and characterization of horizontal transfers in prokaryotes using genomic signature
por: Dufraigne, Christine, et al.
Publicado: (2005)

Methods for detection of horizontal transfer of transposable elements in complete genomes
por: de Carvalho, Marcos Oliveira, et al.
Publicado: (2012)

Detection of horizontal transfer of individual genes by anomalous oligomer frequencies
por: Elhai, Jeff, et al.
Publicado: (2012)

Detecting Horizontal Gene Transfer between Closely Related Taxa
por: Adato, Orit, et al.
Publicado: (2015)

Detection of horizontal gene transfer in the genome of the choanoflagellate Salpingoeca rosetta
por: Matriano, Danielle M., et al.
Publicado: (2021)

Systematic Detection of Large-Scale Multigene Horizontal Transfer in Prokaryotes
por: Kloub, Lina, et al.
Publicado: (2021)

Unique Properties of Eukaryote-Type Actin and Profilin Horizontally Transferred to Cyanobacteria
por: Guljamow, Arthur, et al.
Publicado: (2012)

Horizontal gene transfer in chromalveolates
por: Nosenko, Tetyana, et al.
Publicado: (2007)

Inferring Horizontal Gene Transfer
por: Ravenhall, Matt, et al.
Publicado: (2015)

Horizontal Gene Transfers in Plants
por: Aubin, Emilie, et al.
Publicado: (2021)

Detecting Horizontally Transferred and Essential Genes Based on Dinucleotide Relative Abundance
por: Baran, Robert H., et al.
Publicado: (2008)

Using the nucleotide substitution rate matrix to detect horizontal gene transfer
por: Hamady, Micah, et al.
Publicado: (2006)

A new computational method for the detection of horizontal gene transfer events
por: Tsirigos, Aristotelis, et al.
Publicado: (2005)

Assessing the Probability of Detection of Horizontal Gene Transfer Events in Bacterial Populations
por: Townsend, Jeffrey P., et al.
Publicado: (2012)

HGTphyloDetect: facilitating the identification and phylogenetic analysis of horizontal gene transfer
por: Yuan, Le, et al.
Publicado: (2023)

Natural convective heat transfer from horizontal and near horizontal surfaces
por: Oosthuizen, Patrick H, et al.
Publicado: (2018)

Unexpected complex horizontal gene transfer in teleost fish
por: Han, Zhiqiang, et al.
Publicado: (2022)

Horizontal Transfer of a Plant Transposon
por: Diao, Xianmin, et al.
Publicado: (2006)

Large-scale dynamics of horizontal transfers
por: Grassi, Luigi, et al.
Publicado: (2012)

Horizontal Gene Transfer Involving Chloroplasts
por: Filip, Ewa, et al.
Publicado: (2021)

Indirect identification of horizontal gene transfer
por: Schaller, David, et al.
Publicado: (2021)

The Role of the Environment in Horizontal Gene Transfer
por: Acar Kirit, Hande, et al.
Publicado: (2022)

Is cooperation favored by horizontal gene transfer?
por: Scott, Thomas W, et al.
Publicado: (2023)

The gut microbiota in larvae of the housefly Musca domestica and their horizontal transfer through feeding
por: Zhao, Yao, et al.
Publicado: (2017)

Alienness: Rapid Detection of Candidate Horizontal Gene Transfers across the Tree of Life
por: Rancurel, Corinne, et al.
Publicado: (2017)

Widespread and frequent horizontal transfers of transposable elements in plants
por: El Baidouri, Moaine, et al.
Publicado: (2014)

The Complete Genome Sequence of Plodia Interpunctella Granulovirus: Evidence for Horizontal Gene Transfer and Discovery of an Unusual Inhibitor-of-Apoptosis Gene
por: Harrison, Robert L., et al.
Publicado: (2016)

Horizontal gene transfer in silkworm, Bombyx mori
por: Zhu, Bo, et al.
Publicado: (2011)

Cannot write session to /tmp/vufind_sessions/sess_ogkmcssjffol6sjl9b6i0c0eem